RNA–Protein interactions for RNA: ENST00000562425.1

PKD1-226, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 608 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-226ENST00000562425 CYP26B1Q9NR63 512 aa18.36■□□□□ 0.53
PKD1-226ENST00000562425 CXXC1Q9P0U4 656 aaPredicted RBP18.36■□□□□ 0.53
PKD1-226ENST00000562425 KDM3AQ9Y4C1 1321 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 LYPLA2O95372 231 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 BMP15O95972 392 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 CDC42EP1Q00587 391 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 TJAP1Q5JTD0 557 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 DTHD1Q6ZMT9 781 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 FERMT3Q86UX7 667 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 PHOSPHO2Q8TCD6 241 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 SLC9A7Q96T83 725 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 TUFT1Q9NNX1 390 aa18.35■□□□□ 0.53
PKD1-226ENST00000562425 MUC3AQ02505 3323 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 STX6O43752 255 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 MAFO75444 373 aaPredicted RBP18.34■□□□□ 0.53
PKD1-226ENST00000562425 GHRP10912 638 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 XRCC6P12956 609 aaKnown RBP eCLIP18.34■□□□□ 0.53
PKD1-226ENST00000562425 ATP2A2P16615 1042 aaKnown RBP18.34■□□□□ 0.53
PKD1-226ENST00000562425 RFC5P40937 340 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 TMEM62Q0P6H9 643 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 XKR9Q5GH70 373 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 FBXO47Q5MNV8 452 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 HAUS3Q68CZ6 603 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 TSHZ1Q6ZSZ6 1077 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 SLC7A3Q8WY07 619 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 CCDC43Q96MW1 224 aaKnown RBP18.34■□□□□ 0.53
PKD1-226ENST00000562425 POLR3CQ9BUI4 534 aaPredicted RBP18.34■□□□□ 0.53
PKD1-226ENST00000562425 IFIH1Q9BYX4 1025 aaKnown RBP18.34■□□□□ 0.53
PKD1-226ENST00000562425 ANKEF1Q9NU02 776 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 WRAP73Q9P2S5 460 aaPredicted RBP18.34■□□□□ 0.53
PKD1-226ENST00000562425 LRWD1Q9UFC0 647 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 AKT3Q9Y243 479 aa18.34■□□□□ 0.53
PKD1-226ENST00000562425 SCN5AQ14524 2016 aa18.33■□□□□ 0.53
PKD1-226ENST00000562425 TMEM150BA6NC51 233 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 MUTP22033 750 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 CLCN3P51790 818 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 CRYBB1P53674 252 aaPredicted RBP18.33■□□□□ 0.52
PKD1-226ENST00000562425 ATP2C1P98194 919 aaPredicted RBP18.33■□□□□ 0.52
PKD1-226ENST00000562425 LPIN1Q14693 890 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 RAB30Q15771 203 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 ARL6IP4Q66PJ3 421 aaKnown RBP18.33■□□□□ 0.52
PKD1-226ENST00000562425 PLA2G4FQ68DD2 849 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 LRRC71Q8N4P6 559 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 GAS2L1Q99501 681 aaPredicted RBP18.33■□□□□ 0.52
PKD1-226ENST00000562425 ZSCAN16Q9H4T2 348 aaPredicted RBP18.33■□□□□ 0.52
PKD1-226ENST00000562425 MSRAQ9UJ68 235 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 GINS2Q9Y248 185 aa18.33■□□□□ 0.52
PKD1-226ENST00000562425 IGKV6-21A0A0C4DH24 114 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 GAS2O43903 313 aaKnown RBP18.32■□□□□ 0.52
PKD1-226ENST00000562425 VTNP04004 478 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 RPA1P27694 616 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 POLGP54098 1239 aaPredicted RBP18.32■□□□□ 0.52
PKD1-226ENST00000562425 NPEPPSP55786 919 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 WDR5P61964 334 aaKnown RBP18.32■□□□□ 0.52
PKD1-226ENST00000562425 CATSPER3Q86XQ3 398 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 LINC01465Q8N7H1 131 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 IGSF22Q8N9C0 903 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 CEP89Q96ST8 783 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 SH2D3AQ9BRG2 576 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 MTMR6Q9Y217 621 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 CHD7Q9P2D1 2997 aa18.32■□□□□ 0.52
PKD1-226ENST00000562425 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 AMHP03971 560 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 SPATA31C1P0DKV0 1188 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 CCT6AP40227 531 aaKnown RBP18.31■□□□□ 0.52
PKD1-226ENST00000562425 NLRP11P59045 1033 aaKnown RBP18.31■□□□□ 0.52
PKD1-226ENST00000562425 RESTQ13127 1097 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 PAK2Q13177 524 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 KIZQ2M2Z5 673 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 TCP11Q8WWU5 503 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 SCLT1Q96NL6 688 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 FTHL17Q9BXU8 183 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 PBX4Q9BYU1 374 aa18.31■□□□□ 0.52
PKD1-226ENST00000562425 GRXCR1A8MXD5 290 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 GPR182O15218 404 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 MED24O75448 989 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 RPS6KA5O75582 802 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 BECN1Q14457 450 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 KRT79Q5XKE5 535 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 TET1Q8NFU7 2136 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 ATXN2LQ8WWM7 1075 aaKnown RBP18.3■□□□□ 0.52
PKD1-226ENST00000562425 ZBED2Q9BTP6 218 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 OSBPL7Q9BZF2 842 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 DHX33Q9H6R0 707 aaKnown RBP18.3■□□□□ 0.52
PKD1-226ENST00000562425 SUCLA2Q9P2R7 463 aaPredicted RBP18.3■□□□□ 0.52
PKD1-226ENST00000562425 PCDHA11Q9Y5I1 949 aa18.3■□□□□ 0.52
PKD1-226ENST00000562425 ZBTB39O15060 712 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 GPR32O75388 356 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 DGAT1O75907 488 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 CD52P31358 61 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 GPC3P51654 580 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 SF3A1Q15459 793 aaKnown RBP18.29■□□□□ 0.52
PKD1-226ENST00000562425 TCTN1Q2MV58 587 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 HERC6Q8IVU3 1022 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 ZNF579Q8NAF0 562 aaKnown RBP18.29■□□□□ 0.52
PKD1-226ENST00000562425 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
PKD1-226ENST00000562425 PIGOQ8TEQ8 1089 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms