RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 LZTS1Q9Y250 596 aa11.67□□□□□ -0.54
BBS4-205ENST00000562219 PLXNA3P51805 1871 aa11.67□□□□□ -0.54
BBS4-205ENST00000562219 IGLV3-22A0A075B6J6 115 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 FAM86B1E9PN63 330 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 IPO5O00410 1097 aaKnown RBP11.66□□□□□ -0.54
BBS4-205ENST00000562219 DHX15O43143 795 aaKnown RBP11.66□□□□□ -0.54
BBS4-205ENST00000562219 ZBTB43O43298 467 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 FAM86B2P0C5J1 330 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 FGFR1P11362 822 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 ERVFC1P60507 584 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 SETQ01105 290 aaPredicted RBP11.66□□□□□ -0.54
BBS4-205ENST00000562219 SIGLEC14Q08ET2 396 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 KIZQ2M2Z5 673 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 IER5LQ5T953 404 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 RNF20Q5VTR2 975 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 SWSAP1Q6NVH7 229 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 TMEM184AQ6ZMB5 413 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 FAM228AQ86W67 206 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 PLA2G4DQ86XP0 818 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 CKAP2LQ8IYA6 745 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 RASGRP4Q8TDF6 673 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
BBS4-205ENST00000562219 PPP1R16BQ96T49 567 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 PHOX2BQ99453 314 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 TMEM117Q9H0C3 514 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 CWH43Q9H720 699 aa11.66□□□□□ -0.54
BBS4-205ENST00000562219 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
BBS4-205ENST00000562219 CACNA1HO95180 2353 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 HOXA2O43364 376 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 GPR32O75388 356 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 VTNP04004 478 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 CYP3A4P08684 503 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 ATP4AP20648 1035 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 PPM1AP35813 382 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 FAM189BP81408 668 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 PLCB3Q01970 1234 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 KCNC3Q14003 757 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 DSC3Q14574 896 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 PTPN21Q16825 1174 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 PLPP4Q5VZY2 271 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 ZNF746Q6NUN9 644 aaPredicted RBP11.65□□□□□ -0.54
BBS4-205ENST00000562219 ANKRD54Q6NXT1 300 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 SMAP1Q8IYB5 467 aaPredicted RBP11.65□□□□□ -0.54
BBS4-205ENST00000562219 LRRC43Q8N309 656 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 METTL13Q8N6R0 699 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 CRYGNQ8WXF5 182 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 MRPS27Q92552 414 aaKnown RBP11.65□□□□□ -0.54
BBS4-205ENST00000562219 ASIC4Q96FT7 647 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 TCF25Q9BQ70 676 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 ZNF577Q9BSK1 485 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 NGRNQ9NPE2 291 aaKnown RBP11.65□□□□□ -0.54
BBS4-205ENST00000562219 ENTPD7Q9NQZ7 604 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 TCEAL9Q9UHQ7 104 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 PUF60Q9UHX1 559 aaKnown RBP11.65□□□□□ -0.54
BBS4-205ENST00000562219 BRPF3Q9ULD4 1205 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 CEP131Q9UPN4 1083 aa11.65□□□□□ -0.54
BBS4-205ENST00000562219 MAFBQ9Y5Q3 323 aaPredicted RBP11.65□□□□□ -0.54
BBS4-205ENST00000562219 CFAP54Q96N23 3096 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 GOLGA8AA7E2F4 631 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 GOLGA8BA8MQT2 603 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 PSAPP07602 524 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 HOXB8P17481 243 aaPredicted RBP11.64□□□□□ -0.55
BBS4-205ENST00000562219 TECP42680 631 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 RCAN1P53805 252 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 EXOSC10Q01780 885 aaKnown RBP11.64□□□□□ -0.55
BBS4-205ENST00000562219 APOBRQ0VD83 1088 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 TCF15Q12870 199 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 JAKMIP3Q5VZ66 844 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 DHX32Q7L7V1 743 aaKnown RBP11.64□□□□□ -0.55
BBS4-205ENST00000562219 ABI1Q8IZP0 508 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 FAM167AQ96KS9 214 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 TCEANC2Q96MN5 208 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 MAP7D2Q96T17 732 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 S1PR5Q9H228 398 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 TBC1D22BQ9NU19 505 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 PCDHA10Q9Y5I2 948 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 C2orf16Q68DN1 1984 aa11.64□□□□□ -0.55
BBS4-205ENST00000562219 KLF18A0A0U1RQI7 1052 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 HIDE1A8MVS5 230 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 MAGEB2O15479 319 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 CLCN3P51790 818 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 VCPP55072 806 aaKnown RBP11.63□□□□□ -0.55
BBS4-205ENST00000562219 KRT17Q04695 432 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 PFKFB3Q16875 520 aaPredicted RBP11.63□□□□□ -0.55
BBS4-205ENST00000562219 MCTP2Q6DN12 878 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 LLGL2Q6P1M3 1020 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 SYCE2Q6PIF2 218 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 KCNT2Q6UVM3 1135 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 TRMT1LQ7Z2T5 733 aaKnown RBP11.63□□□□□ -0.55
BBS4-205ENST00000562219 REXO1Q8N1G1 1221 aaKnown RBP11.63□□□□□ -0.55
BBS4-205ENST00000562219 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 ZNF558Q96NG5 402 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 CASD1Q96PB1 797 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 FAM217BQ9NTX9 383 aaPredicted RBP11.63□□□□□ -0.55
BBS4-205ENST00000562219 RNF19AQ9NV58 838 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 AKT3Q9Y243 479 aa11.63□□□□□ -0.55
BBS4-205ENST00000562219 ZSCAN20P17040 1043 aaPredicted RBP11.62□□□□□ -0.55
BBS4-205ENST00000562219 EIF4BP23588 611 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms