RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 C19orf73Q9NVV2 129 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 HDAC9Q9UKV0 1011 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 GPR55Q9Y2T6 319 aaPredicted RBP7.11□□□□□ -1.27
UBR1-203ENST00000562173 ECM29Q5VYK3 1845 aa7.11□□□□□ -1.27
UBR1-203ENST00000562173 SASH1O94885 1247 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 FGFR1P11362 822 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 ITGB5P18084 799 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 SEPHS1P49903 392 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 MAP4K2Q12851 820 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 TESK1Q15569 626 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 ACBD5Q5T8D3 534 aaPredicted RBP7.1□□□□□ -1.27
UBR1-203ENST00000562173 SP8Q8IXZ3 490 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 C2orf69Q8N8R5 385 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 BTN2A2Q8WVV5 523 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 PTCHD1Q96NR3 888 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 ARHGEF4Q9NR80 690 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 SAGE1Q9NXZ1 904 aa7.1□□□□□ -1.27
UBR1-203ENST00000562173 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.27
UBR1-203ENST00000562173 TRAV20A0A0B4J274 112 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 A0A1W2PQ45 241 aaPredicted RBP7.09□□□□□ -1.27
UBR1-203ENST00000562173 A0A1W2PQY0 241 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 FAM221BA6H8Z2 402 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 C2orf71A6NGG8 1288 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 H0YGN5 161 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 H7C1D1 291 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 JUNBP17275 347 aaPredicted RBP7.09□□□□□ -1.27
UBR1-203ENST00000562173 KLRK1P26718 216 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 TXKP42681 527 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 AFMP43652 599 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 GFRA1P56159 465 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 CORO7P57737 925 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 HLA-DQA1Q5Y7H0 255 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 E4F1Q66K89 784 aaPredicted RBP7.09□□□□□ -1.27
UBR1-203ENST00000562173 OTOP1Q7RTM1 612 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 SLCO6A1Q86UG4 719 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 NLRP10Q86W26 655 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 FAM89AQ96GI7 184 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 MCMBPQ9BTE3 642 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 TRIM17Q9Y577 477 aa7.09□□□□□ -1.27
UBR1-203ENST00000562173 DOCK3Q8IZD9 2030 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 MYH3P11055 1940 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 FADS2P1A8MWK0 482 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 SNAP23O00161 211 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 TBX1O43435 398 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 ADCY3O60266 1144 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 HK2P52789 917 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 SCRN1Q12765 414 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 KCNAB2Q13303 367 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 GRAPQ13588 217 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 SNX17Q15036 470 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 DPY19L1Q2PZI1 675 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 C2orf27AQ580R0 203 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 FBXO46Q6PJ61 603 aaPredicted RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 KIF6Q6ZMV9 814 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 SPATC1Q76KD6 591 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 NOP9Q86U38 636 aaKnown RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 TBC1D16Q8TBP0 767 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 GRAPLQ8TC17 118 aaPredicted RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 THAP3Q8WTV1 239 aaPredicted RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 KCTD13Q8WZ19 329 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 DCPSQ96C86 337 aaKnown RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 UTP14AQ9BVJ6 771 aaKnown RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 PCGF6Q9BYE7 350 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 ARHGAP39Q9C0H5 1083 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 NYXQ9GZU5 481 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 TAF6LQ9Y6J9 622 aa7.08□□□□□ -1.28
UBR1-203ENST00000562173 IBTKQ9P2D0 1353 aaPredicted RBP7.08□□□□□ -1.28
UBR1-203ENST00000562173 ERVV-1B6SEH8 477 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 NRDCO43847 1150 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 VAMP4O75379 141 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 SNRPB2P08579 225 aaKnown RBP7.07□□□□□ -1.28
UBR1-203ENST00000562173 U2AF1L5P0DN76 240 aaPredicted RBP7.07□□□□□ -1.28
UBR1-203ENST00000562173 PAMP19021 973 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 U2AF1Q01081 240 aaKnown RBP eCLIP7.07□□□□□ -1.28
UBR1-203ENST00000562173 SLC10A5Q5PT55 438 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 COPS6Q7L5N1 327 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 ZBTB38Q8NAP3 1195 aaPredicted RBP7.07□□□□□ -1.28
UBR1-203ENST00000562173 NPLOC4Q8TAT6 608 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 JAG2Q9Y219 1238 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 ZNF609O15014 1411 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 MGAMO43451 1857 aa7.07□□□□□ -1.28
UBR1-203ENST00000562173 USP2O75604 605 aaPredicted RBP7.06□□□□□ -1.28
UBR1-203ENST00000562173 THBDP07204 575 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 CTGFP29279 349 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 TNIP1Q15025 636 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 TAF7Q15545 349 aaPredicted RBP7.06□□□□□ -1.28
UBR1-203ENST00000562173 TMEM67Q5HYA8 995 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 IQCEQ6IPM2 695 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 GALNT18Q6P9A2 607 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 ZPBP2Q6X784 338 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 CEP128Q6ZU80 1094 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 ZSWIM2Q8NEG5 633 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 SH3TC2Q8TF17 1288 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 MYLIPQ8WY64 445 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 SHISA4Q96DD7 197 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 C1orf159Q96HA4 380 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 MMP19Q99542 508 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 DNAJC7Q99615 494 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 PTPN18Q99952 460 aa7.06□□□□□ -1.28
UBR1-203ENST00000562173 SP110Q9HB58 689 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms