RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 F8VZ95 297 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 PFDN1O60925 122 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 BMP15O95972 392 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 EIF4BP23588 611 aaKnown RBP20.17■□□□□ 0.82
RAB40C-206ENST00000561781 CEP128Q6ZU80 1094 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 TTLL11Q8NHH1 800 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 LPIN2Q92539 896 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 ZKSCAN3Q9BRR0 538 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
RAB40C-206ENST00000561781 SMAPO00193 183 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 PDE8AO60658 829 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 KRT2P35908 639 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 RASSF7Q02833 373 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 TTI2Q6NXR4 508 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 TMC3Q7Z5M5 1100 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 KLHL7Q8IXQ5 586 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 USP38Q8NB14 1042 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 CFAP61Q8NHU2 1237 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 SH3TC2Q8TF17 1288 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 C17orf50Q8WW18 174 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 PPP1R14BQ96C90 147 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 PRMT1Q99873 361 aaKnown RBP20.16■□□□□ 0.82
RAB40C-206ENST00000561781 CEP126Q9P2H0 1117 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 ZNF189O75820 626 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-206ENST00000561781 SHBGP04278 402 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 PTDSS1P48651 473 aaKnown RBP20.16■□□□□ 0.82
RAB40C-206ENST00000561781 TMEM62Q0P6H9 643 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 RINLQ6ZS11 566 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 CSGALNACT2Q8N6G5 542 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 INPP4AQ96PE3 977 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-206ENST00000561781 TMEM59LQ9UK28 342 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 LAMB2P55268 1798 aa20.16■□□□□ 0.82
RAB40C-206ENST00000561781 SKIP12755 728 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 ZNF24P17028 368 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 ATP2C1P98194 919 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-206ENST00000561781 SFMBT2Q5VUG0 894 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 SMC1BQ8NDV3 1235 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 ATP8B4Q8TF62 1192 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 PGM2Q96G03 612 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 CARD9Q9H257 536 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 GGT7Q9UJ14 662 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 MAGEA13PA6NCF6 341 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 TMEM221A6NGB7 291 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 BHMG1C9JSJ3 638 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-206ENST00000561781 PSMA7O14818 248 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 E2F6O75461 281 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 ADD2P35612 726 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 SERPINB4P48594 390 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 CACNA2D1P54289 1103 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 MIIPQ5JXC2 388 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 TTC38Q5R3I4 469 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 CELF1Q92879 486 aaKnown RBP20.15■□□□□ 0.82
RAB40C-206ENST00000561781 CNOT6LQ96LI5 555 aaKnown RBP20.15■□□□□ 0.82
RAB40C-206ENST00000561781 DUSP9Q99956 384 aaKnown RBP20.15■□□□□ 0.82
RAB40C-206ENST00000561781 SYT17Q9BSW7 474 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.15■□□□□ 0.82
RAB40C-206ENST00000561781 CD2APQ9Y5K6 639 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 TACC3Q9Y6A5 838 aa20.15■□□□□ 0.82
RAB40C-206ENST00000561781 CETN3O15182 167 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 NKRFO15226 690 aaKnown RBP eCLIP20.14■□□□□ 0.82
RAB40C-206ENST00000561781 CIAO1O76071 339 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 GJB6O95452 261 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 KCNA3P22001 575 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 GJA8P48165 433 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 MCL1Q07820 350 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 SLC10A5Q5PT55 438 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 CC2D2BQ6DHV5 1058 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 DDX42Q86XP3 938 aaKnown RBP eCLIP20.14■□□□□ 0.82
RAB40C-206ENST00000561781 ERGIC2Q96RQ1 377 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 NUDCD1Q96RS6 583 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 PYM1Q9BRP8 204 aaKnown RBP20.14■□□□□ 0.82
RAB40C-206ENST00000561781 NOC4LQ9BVI4 516 aaKnown RBP20.14■□□□□ 0.82
RAB40C-206ENST00000561781 PPP1R12CQ9BZL4 782 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 ARL2BPQ9Y2Y0 163 aa20.14■□□□□ 0.82
RAB40C-206ENST00000561781 EPHB6O15197 1021 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 MBD4O95243 580 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 FTCDO95954 541 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
RAB40C-206ENST00000561781 MTIF2P46199 727 aaKnown RBP20.14■□□□□ 0.81
RAB40C-206ENST00000561781 GFPT1Q06210 699 aaPredicted RBP20.14■□□□□ 0.81
RAB40C-206ENST00000561781 IL17AQ16552 155 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 RASIP1Q5U651 963 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 TMC4Q7Z404 712 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 UCMAQ8WVF2 138 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 PHF20Q9BVI0 1012 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 NEUROG2Q9H2A3 272 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 ADAM7Q9H2U9 754 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 LRRC4CQ9HCJ2 640 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 FAM114A2Q9NRY5 505 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 SUN2Q9UH99 717 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 COMMD3-BMI1R4GMX3 469 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 MYH2Q9UKX2 1941 aa20.14■□□□□ 0.81
RAB40C-206ENST00000561781 CES2O00748 559 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 NVLO15381 856 aaKnown RBP20.13■□□□□ 0.81
RAB40C-206ENST00000561781 PRDM1O75626 825 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 UNC5CO95185 931 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 LMNAP02545 664 aaKnown RBP20.13■□□□□ 0.81
RAB40C-206ENST00000561781 ITGA6P23229 1130 aa20.13■□□□□ 0.81
RAB40C-206ENST00000561781 BPIFB4P59827 614 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms