RNA–Protein interactions for RNA: ENST00000561308.5

LINS1-214, Transcript of lines homolog 1, humanhuman

TSL 1 (best) BASIC

Gene LINS1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-214ENST00000561308 GULP1Q9UBP9 304 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 ATP10DQ9P241 1426 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 LY75O60449 1722 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 NUP98P52948 1817 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 TAF1LQ8IZX4 1826 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 ZNF831Q5JPB2 1677 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 RREB1Q92766 1687 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 NOBOXO60393 691 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 PPP1R11O60927 126 aaPredicted RBP6.87□□□□□ -1.31
LINS1-214ENST00000561308 ZBTB7AO95365 584 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 STARD3NLO95772 234 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 NBPF7P0C2Y1 421 aaPredicted RBP6.87□□□□□ -1.31
LINS1-214ENST00000561308 GJA9P57773 515 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 PAK2Q13177 524 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 ZNF772Q68DY9 489 aaPredicted RBP6.87□□□□□ -1.31
LINS1-214ENST00000561308 HHIPL2Q6UWX4 724 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 USP33Q8TEY7 942 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 DDX1Q92499 740 aaKnown RBP6.87□□□□□ -1.31
LINS1-214ENST00000561308 MYD88Q99836 296 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 MTA3Q9BTC8 594 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 CGGBP1Q9UFW8 167 aaPredicted RBP6.87□□□□□ -1.31
LINS1-214ENST00000561308 ZBTB1Q9Y2K1 713 aa6.87□□□□□ -1.31
LINS1-214ENST00000561308 EP400Q96L91 3159 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 GNAI3P08754 354 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 PAMP19021 973 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 CNR2P34972 360 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 RBM6P78332 1123 aaKnown RBP6.86□□□□□ -1.31
LINS1-214ENST00000561308 CACNB2Q08289 660 aaPredicted RBP6.86□□□□□ -1.31
LINS1-214ENST00000561308 CEP85Q6P2H3 762 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 KRT27Q7Z3Y8 459 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 ARHGEF39Q8N4T4 335 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 ANKRD44Q8N8A2 993 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 C19orf47Q8N9M1 422 aaKnown RBP6.86□□□□□ -1.31
LINS1-214ENST00000561308 LINS1Q8NG48 757 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 PLBD2Q8NHP8 589 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 SPATA32Q96LK8 384 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 NOX5Q96PH1 765 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 NTMQ9P121 344 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 EFR3BQ9Y2G0 817 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 LRRFIP2Q9Y608 721 aaKnown RBP6.86□□□□□ -1.31
LINS1-214ENST00000561308 DUSP10Q9Y6W6 482 aa6.86□□□□□ -1.31
LINS1-214ENST00000561308 ANKRD36CQ5JPF3 1778 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 TRBV23OR9-2A0A075B6M9 112 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 NPHP3-ACAD11A0A0J9YXS1 232 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 A0A1W2PQH9 124 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 ALDH1L1O75891 902 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 GNAI2P04899 355 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 UBTFL1P0CB47 393 aaPredicted RBP6.85□□□□□ -1.31
LINS1-214ENST00000561308 INSRRP14616 1297 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 CRKLP46109 303 aaKnown RBP6.85□□□□□ -1.31
LINS1-214ENST00000561308 SOX9P48436 509 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 GIPRP48546 466 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 SARSP49591 514 aaKnown RBP6.85□□□□□ -1.31
LINS1-214ENST00000561308 GRB10Q13322 594 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 ZNF654Q8IZM8 581 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 RCC1LQ96I51 464 aaKnown RBP6.85□□□□□ -1.31
LINS1-214ENST00000561308 LNPKQ9C0E8 428 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 PALD1Q9ULE6 856 aa6.85□□□□□ -1.31
LINS1-214ENST00000561308 PNMA6EA0A0J9YXQ4 647 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 RGS3P49796 1198 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 NEXNQ0ZGT2 675 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 GCKRQ14397 625 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 ZNF827Q17R98 1081 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 SMIM5Q71RC9 77 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 RPAP2Q8IXW5 612 aaPredicted RBP6.84□□□□□ -1.31
LINS1-214ENST00000561308 SMC5Q8IY18 1101 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 OR6P1Q8NGX9 317 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 ZBTB8AQ96BR9 441 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 GPR20Q99678 358 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 SPATA6Q9NWH7 488 aaPredicted RBP6.84□□□□□ -1.31
LINS1-214ENST00000561308 C9orf78Q9NZ63 289 aaPredicted RBP6.84□□□□□ -1.31
LINS1-214ENST00000561308 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.84□□□□□ -1.31
LINS1-214ENST00000561308 SUGT1Q9Y2Z0 365 aa6.84□□□□□ -1.31
LINS1-214ENST00000561308 GRM8O00222 908 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 NPHS1O60500 1241 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 RBM10P98175 930 aaKnown RBP6.83□□□□□ -1.32
LINS1-214ENST00000561308 ATP8B2P98198 1209 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 HLFQ16534 295 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 KLHL6Q8WZ60 621 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 KAZALD1Q96I82 304 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 SUCLG2Q96I99 432 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 UTYO14607 1347 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 C7orf72A4D263 438 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 IL6STP40189 918 aaPredicted RBP6.83□□□□□ -1.32
LINS1-214ENST00000561308 EIF5P55010 431 aaKnown RBP6.83□□□□□ -1.32
LINS1-214ENST00000561308 NUCB1Q02818 461 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 PUM1Q14671 1186 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINS1-214ENST00000561308 ANKRD45Q5TZF3 282 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 KIF6Q6ZMV9 814 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 ZNF761Q86XN6 746 aaPredicted RBP6.83□□□□□ -1.32
LINS1-214ENST00000561308 DDX11Q96FC9 970 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 TMPRSS5Q9H3S3 457 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 DCTPP1Q9H773 170 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 MYRFQ9Y2G1 1151 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 MAP3K15Q6ZN16 1313 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 BCORQ6W2J9 1755 aa6.83□□□□□ -1.32
LINS1-214ENST00000561308 C4BP0C0L5 1744 aa6.82□□□□□ -1.32
LINS1-214ENST00000561308 SMARCA5O60264 1052 aaPredicted RBP6.82□□□□□ -1.32
LINS1-214ENST00000561308 FUCA1P04066 466 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms