RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZSWIM4Q9H7M6 989 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 CEP131Q9UPN4 1083 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 GINS2Q9Y248 185 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 NOC2LQ9Y3T9 749 aaKnown RBP15.57■□□□□ 0.08
TPM1-230ENST00000561266 KDM3AQ9Y4C1 1321 aa15.57■□□□□ 0.08
TPM1-230ENST00000561266 TTC3P53804 2025 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 MAGEB2O15479 319 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 MAFO75444 373 aaPredicted RBP15.56■□□□□ 0.08
TPM1-230ENST00000561266 LYPLA2O95372 231 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 ACTN1P12814 892 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 ATP2A2P16615 1042 aaKnown RBP15.56■□□□□ 0.08
TPM1-230ENST00000561266 DNAJB2P25686 324 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 ATP2C1P98194 919 aaPredicted RBP15.56■□□□□ 0.08
TPM1-230ENST00000561266 GRIN1Q05586 938 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 TBC1D8BQ0IIM8 1120 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 IER5Q5VY09 327 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 SPRED2Q7Z698 418 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 KSR1Q8IVT5 923 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 IGSF22Q8N9C0 903 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 CEP170P1Q96L14 293 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 FAM161BQ96MY7 647 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 OSMRQ99650 979 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 MMTAG2Q9BU76 263 aaKnown RBP15.56■□□□□ 0.08
TPM1-230ENST00000561266 IFIH1Q9BYX4 1025 aaKnown RBP15.56■□□□□ 0.08
TPM1-230ENST00000561266 TMX1Q9H3N1 280 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 XPNPEP1Q9NQW7 623 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 CHD7Q9P2D1 2997 aa15.56■□□□□ 0.08
TPM1-230ENST00000561266 ABHD14A-ACY1A0A1B0GW23 586 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 MGEA5O60502 916 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 CSDE1O75534 798 aaKnown RBP15.55■□□□□ 0.08
TPM1-230ENST00000561266 BAIAP3O94812 1187 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 GPC3P51654 580 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 NLRP11P59045 1033 aaKnown RBP15.55■□□□□ 0.08
TPM1-230ENST00000561266 PKP1Q13835 747 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 IKBKEQ14164 716 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 XKR9Q5GH70 373 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 POTEGQ6S5H5 508 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 TSHZ1Q6ZSZ6 1077 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 HERC6Q8IVU3 1022 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 SEPT8Q92599 483 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 TMEM143Q96AN5 459 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 POLR3CQ9BUI4 534 aaPredicted RBP15.55■□□□□ 0.08
TPM1-230ENST00000561266 NKX2-4Q9H2Z4 354 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 DHX33Q9H6R0 707 aaKnown RBP15.55■□□□□ 0.08
TPM1-230ENST00000561266 ERVK-5Q9HDB9 667 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 PADI3Q9ULW8 664 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 AKT3Q9Y243 479 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 CLIC4Q9Y696 253 aa15.55■□□□□ 0.08
TPM1-230ENST00000561266 COL4A6Q14031 1691 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 LCHNA4D1U4 455 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 ENPP3O14638 875 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 STX6O43752 255 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 PDCP20941 246 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 FGFR4P22455 802 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 RARRES1P49788 294 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 FAM117BQ6P1L5 589 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 KCNK18Q7Z418 384 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 BRAPQ7Z569 592 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 FAM228AQ86W67 206 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 SEMA6BQ9H3T3 888 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 TUFT1Q9NNX1 390 aa15.54■□□□□ 0.08
TPM1-230ENST00000561266 RPA1P27694 616 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 PRPHP41219 470 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 CRYBB1P53674 252 aaPredicted RBP15.53■□□□□ 0.08
TPM1-230ENST00000561266 PTPAQ15257 358 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 SF3A1Q15459 793 aaKnown RBP15.53■□□□□ 0.08
TPM1-230ENST00000561266 FOXD4L5Q5VV16 416 aaPredicted RBP15.53■□□□□ 0.08
TPM1-230ENST00000561266 GPR153Q6NV75 609 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 DEFB123Q8N688 67 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 NEK9Q8TD19 979 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 FOXD4L4Q8WXT5 416 aaPredicted RBP15.53■□□□□ 0.08
TPM1-230ENST00000561266 GUCD1Q96NT3 240 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 SLC9A7Q96T83 725 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 MTIF3Q9H2K0 278 aaKnown RBP15.53■□□□□ 0.08
TPM1-230ENST00000561266 POLD4Q9HCU8 107 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 MTMR10Q9NXD2 777 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 SUCLA2Q9P2R7 463 aaPredicted RBP15.53■□□□□ 0.08
TPM1-230ENST00000561266 LRWD1Q9UFC0 647 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 ST3GAL5Q9UNP4 418 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 SQORQ9Y6N5 450 aa15.53■□□□□ 0.08
TPM1-230ENST00000561266 A0A087WZ62 844 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 M0QZ92 97 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 DKC1O60832 514 aaKnown RBP eCLIP15.52■□□□□ 0.08
TPM1-230ENST00000561266 KCNJ6P48051 423 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 PDIA5Q14554 519 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 EMC2Q15006 297 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 DTHD1Q6ZMT9 781 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 MYOCDQ8IZQ8 938 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 CRIPAKQ8N1N5 446 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 PHOSPHO2Q8TCD6 241 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 LRRC15Q8TF66 581 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 TIFAQ96CG3 184 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 FDXACB1Q9BRP7 624 aaPredicted RBP15.52■□□□□ 0.08
TPM1-230ENST00000561266 ANKEF1Q9NU02 776 aa15.52■□□□□ 0.08
TPM1-230ENST00000561266 VWA3AA6NCI4 1184 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 LAD1O00515 517 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 RPS6KA5O75582 802 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 GJB5O95377 273 aa15.51■□□□□ 0.07
TPM1-230ENST00000561266 RPLP2P05387 115 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms