RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 TMX1Q9H3N1 280 aa18.87■□□□□ 0.61
HDDC3-206ENST00000561036 MLXIPQ9HAP2 919 aa18.87■□□□□ 0.61
HDDC3-206ENST00000561036 SPTLC3Q9NUV7 552 aa18.87■□□□□ 0.61
HDDC3-206ENST00000561036 CGNQ9P2M7 1197 aaKnown RBP18.87■□□□□ 0.61
HDDC3-206ENST00000561036 TLL2Q9Y6L7 1015 aa18.87■□□□□ 0.61
HDDC3-206ENST00000561036 RBM47A0AV96 593 aaKnown RBP18.86■□□□□ 0.61
HDDC3-206ENST00000561036 AKR1B15C9JRZ8 316 aaPredicted RBP18.86■□□□□ 0.61
HDDC3-206ENST00000561036 SLC16A3O15427 465 aaKnown RBP18.86■□□□□ 0.61
HDDC3-206ENST00000561036 OATP04181 439 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 NPEPPSP55786 919 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 SNRPFP62306 86 aaKnown RBP18.86■□□□□ 0.61
HDDC3-206ENST00000561036 SP4Q02446 784 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 PPP2R3AQ06190 1150 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 ADAM9Q13443 819 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 MYBPC2Q14324 1141 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 MIIPQ5JXC2 388 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 PLA2G4FQ68DD2 849 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 ARMCX2Q7L311 632 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 HS2ST1Q7LGA3 356 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 CNGA4Q8IV77 575 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 MSL3Q8N5Y2 521 aaKnown RBP18.86■□□□□ 0.61
HDDC3-206ENST00000561036 RETREG2Q8NC44 543 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 TMEM174Q8WUU8 243 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 SPIRE2Q8WWL2 714 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 HVCN1Q96D96 273 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 FAM167AQ96KS9 214 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 PANX2Q96RD6 677 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 ERGIC2Q96RQ1 377 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 NUP58Q9BVL2 599 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 PDLIM7Q9NR12 457 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 CYP26B1Q9NR63 512 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 KCND1Q9NSA2 647 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 NRBP2Q9NSY0 501 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 SLC5A4Q9NY91 659 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 ZNF236Q9UL36 1845 aa18.86■□□□□ 0.61
HDDC3-206ENST00000561036 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 SCP2P22307 547 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 NR2F2P24468 414 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 ABCD1P33897 745 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 TBC1D8BQ0IIM8 1120 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 LY6KQ17RY6 165 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 CCDC40Q4G0X9 1142 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 EEPD1Q7L9B9 569 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 FRMD5Q7Z6J6 570 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 TC2NQ8N9U0 490 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 HHIPL1Q96JK4 782 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 NTPCRQ9BSD7 190 aaKnown RBP18.85■□□□□ 0.61
HDDC3-206ENST00000561036 NDST4Q9H3R1 872 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 TMEM206Q9H813 350 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 METTL14Q9HCE5 456 aaKnown RBP18.85■□□□□ 0.61
HDDC3-206ENST00000561036 POLD4Q9HCU8 107 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 SEPT9Q9UHD8 586 aaPredicted RBP18.85■□□□□ 0.61
HDDC3-206ENST00000561036 FAM184BQ9ULE4 1060 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 TELO2Q9Y4R8 837 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 DOCK5Q9H7D0 1870 aa18.85■□□□□ 0.61
HDDC3-206ENST00000561036 TMEM150BA6NC51 233 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 IGF2BP3O00425 579 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDDC3-206ENST00000561036 PES1O00541 588 aaKnown RBP18.84■□□□□ 0.61
HDDC3-206ENST00000561036 TGFB1I1O43294 461 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 LGR5O75473 907 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 ARIH2O95376 493 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 NR3C1P04150 777 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 SMTNP53814 917 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 NCKAP1LP55160 1127 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 GTF2BQ00403 316 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 NOLC1Q14978 699 aaKnown RBP eCLIP18.84■□□□□ 0.61
HDDC3-206ENST00000561036 FAM102BQ5T8I3 360 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 DPP9Q86TI2 863 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 TRIM59Q8IWR1 403 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 FBXO16Q8IX29 292 aaPredicted RBP18.84■□□□□ 0.61
HDDC3-206ENST00000561036 DHX37Q8IY37 1157 aaKnown RBP18.84■□□□□ 0.61
HDDC3-206ENST00000561036 EEF2KMTQ96G04 330 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 ACCSQ96QU6 501 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 GBP3Q9H0R5 595 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 ATP6V0A4Q9HBG4 840 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 PLXNA1Q9UIW2 1896 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 ARID2Q68CP9 1835 aa18.84■□□□□ 0.61
HDDC3-206ENST00000561036 ZMYM2Q9UBW7 1377 aa18.83■□□□□ 0.61
HDDC3-206ENST00000561036 MYH11P35749 1972 aa18.83■□□□□ 0.61
HDDC3-206ENST00000561036 H0YCG3 227 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 K7ENM7 598 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 STX10O60499 249 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 MFAP3LO75121 409 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 TXNP10599 105 aaKnown RBP18.83■□□□□ 0.6
HDDC3-206ENST00000561036 ATP4AP20648 1035 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 RFC5P40937 340 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 SLC26A2P50443 739 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 STAT5BP51692 787 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 RBL2Q08999 1139 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 SREBF2Q12772 1141 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 IRF5Q13568 498 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 LAMC2Q13753 1193 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 PTPN21Q16825 1174 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 ZC2HC1CQ53FD0 456 aaPredicted RBP18.83■□□□□ 0.6
HDDC3-206ENST00000561036 FIGNQ5HY92 759 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 MAEAQ7L5Y9 396 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 PLPPR4Q7Z2D5 763 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 IFNL1Q8IU54 200 aa18.83■□□□□ 0.6
HDDC3-206ENST00000561036 SLC9A9Q8IVB4 645 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms