RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 EVA1CP58658 441 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 SLFN11Q7Z7L1 901 aa17.88■□□□□ 0.45
TPM1-228ENST00000560975 ZNF444Q8N0Y2 327 aaPredicted RBP17.88■□□□□ 0.45
TPM1-228ENST00000560975 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
TPM1-228ENST00000560975 USP15Q9Y4E8 981 aaPredicted RBP17.88■□□□□ 0.45
TPM1-228ENST00000560975 DDX3XO00571 662 aaKnown RBP eCLIP17.87■□□□□ 0.452e-8■■■■□ 19.9
TPM1-228ENST00000560975 MYBL1P10243 752 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 ALADP13716 330 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
TPM1-228ENST00000560975 GALCP54803 685 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 PTENP60484 403 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 COPS2P61201 443 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 CNGA2Q16280 664 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 EXOC3L4Q17RC7 722 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 ANKRD20A2Q5SQ80 823 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 THEMIS2Q5TEJ8 643 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 ANKRD20A1Q5TYW2 823 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 ANKRD20A3Q5VUR7 823 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 JAMLQ86YT9 394 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 SYCE1Q8N0S2 351 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 SCFD1Q8WVM8 642 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 RAB34Q9BZG1 259 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 FOXO6A8MYZ6 492 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 CETN3O15182 167 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 GFPT2O94808 682 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 PDE6CP51160 858 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 SBK1Q52WX2 424 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 KIAA1755Q5JYT7 1200 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 ZDHHC24Q6UX98 284 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 CCDC25Q86WR0 208 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 ANKRD42Q8N9B4 389 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 COA7Q96BR5 231 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 BMP2KQ9NSY1 1161 aaPredicted RBP17.87■□□□□ 0.45
TPM1-228ENST00000560975 EMILIN3Q9NT22 766 aa17.87■□□□□ 0.45
TPM1-228ENST00000560975 NIP7Q9Y221 180 aaKnown RBP eCLIP17.87■□□□□ 0.45
TPM1-228ENST00000560975 RPTORQ8N122 1335 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 PON1P27169 355 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 ABL2P42684 1182 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 MSH2P43246 934 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 TAF11Q15544 211 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 C6orf118Q5T5N4 469 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 AP1ARQ63HQ0 302 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 NUGGCQ68CJ6 796 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 C18orf8Q96DM3 657 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 TMOD4Q9NZQ9 345 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 ADAM22Q9P0K1 906 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 COL4A1P02462 1669 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 ZNF142P52746 1687 aaPredicted RBP17.86■□□□□ 0.45
TPM1-228ENST00000560975 AP1G2O75843 785 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 AGTP01019 485 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 CREB1P16220 341 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 TNNI2P48788 182 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 VPS36Q86VN1 386 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 CEP120Q8N960 986 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 LRRC27Q9C0I9 530 aa17.86■□□□□ 0.45
TPM1-228ENST00000560975 SAP30BPQ9UHR5 308 aaKnown RBP17.86■□□□□ 0.45
TPM1-228ENST00000560975 BZW2Q9Y6E2 419 aaKnown RBP17.86■□□□□ 0.45
TPM1-228ENST00000560975 GOLGA6L10A0A0M3HER8 536 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 KRT18P05783 430 aaKnown RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 ATP2A2P16615 1042 aaKnown RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 MKRN4PQ13434 485 aaPredicted RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 TMEM119Q4V9L6 283 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 GDAP1Q8TB36 358 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 SLC35G2Q8TBE7 412 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 ANKRD36CQ5JPF3 1778 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 IGSF9BQ9UPX0 1349 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 RASGRF2O14827 1237 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 KIAA0391O15091 583 aaKnown RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 IL6STP40189 918 aaPredicted RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 LACTBP83111 547 aaPredicted RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 ADCY2Q08462 1091 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 BARGINQ6ZT62 677 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 SLC17A8Q8NDX2 589 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 SH3GL3Q99963 347 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 KCTD10Q9H3F6 313 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 DDX3YO15523 660 aaKnown RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 SUN1O94901 812 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 ATP11AP98196 1134 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 BNIP1Q12981 228 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 SLMAPQ14BN4 828 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 DPY19L2P1Q6NXN4 242 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 C3orf67Q6ZVT6 689 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 GPBP1Q86WP2 473 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 COL23A1Q86Y22 540 aaPredicted RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 GLYCTKQ8IVS8 523 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 CCDC65Q8IXS2 484 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 CNKSR1Q969H4 720 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 ARMCX3Q9UH62 379 aaPredicted RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 CORO1CQ9ULV4 474 aaPredicted RBP17.85■□□□□ 0.45
TPM1-228ENST00000560975 KIAA1024Q9UPX6 916 aa17.85■□□□□ 0.45
TPM1-228ENST00000560975 RREB1Q92766 1687 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 EDIL3O43854 480 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 AFPP02771 609 aaKnown RBP17.84■□□□□ 0.45
TPM1-228ENST00000560975 LINGO3P0C6S8 592 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 PLCG2P16885 1265 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 RPL21P46778 160 aaKnown RBP17.84■□□□□ 0.45
TPM1-228ENST00000560975 AUHQ13825 339 aaKnown RBP17.84■□□□□ 0.45
TPM1-228ENST00000560975 BLMHQ13867 455 aa17.84■□□□□ 0.45
TPM1-228ENST00000560975 UBE4AQ14139 1066 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms