RNA–Protein interactions for RNA: ENST00000560852.1

IRF9-211, Transcript of interferon regulatory factor 9, humanhuman

TSL 3

Gene IRF9, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-211ENST00000560852 CCDC155Q8N6L0 562 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 ENGASEQ8NFI3 743 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 TCP11Q8WWU5 503 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 RAD54LQ92698 747 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 NTPCRQ9BSD7 190 aaKnown RBP13.49□□□□□ -0.25
IRF9-211ENST00000560852 NFKBIZQ9BYH8 718 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 BHMT2Q9H2M3 363 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 KCNG1Q9UIX4 513 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 KCNH3Q9ULD8 1083 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 NR2E3Q9Y5X4 410 aa13.49□□□□□ -0.25
IRF9-211ENST00000560852 DNAH12Q6ZR08 3092 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 TRIM43BA6NCK2 446 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 E9PMD0 336 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
IRF9-211ENST00000560852 PLA2G4BP0C869 781 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 CYP2C9P11712 490 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 CKBP12277 381 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 NCLP19338 710 aaKnown RBP13.48□□□□□ -0.25
IRF9-211ENST00000560852 SCP2P22307 547 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 RFC2P35250 354 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 DNM2P50570 870 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 MGAT3Q09327 533 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 MTERF2Q49AM1 385 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 SPECC1Q5M775 1068 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 PLA2G4FQ68DD2 849 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 EFCAB12Q6NXP0 572 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 PADI6Q6TGC4 694 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 RSPH3Q86UC2 560 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 USP38Q8NB14 1042 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 TRAPPC12Q8WVT3 735 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 LARP4BQ92615 738 aaKnown RBP13.48□□□□□ -0.25
IRF9-211ENST00000560852 WNT8BQ93098 351 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 TRIM43Q96BQ3 446 aaPredicted RBP13.48□□□□□ -0.25
IRF9-211ENST00000560852 CDK5RAP3Q96JB5 506 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 TMEM39AQ9NV64 488 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 ATP11BQ9Y2G3 1177 aa13.48□□□□□ -0.25
IRF9-211ENST00000560852 ARHGEF35A5YM69 484 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 TMEM150BA6NC51 233 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 EVI5O60447 810 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 GPR32O75388 356 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 CXCL10P02778 98 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 MYL1P05976 194 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 SLFN14P0C7P3 912 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 SELPP16109 830 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 SNW1Q13573 536 aaKnown RBP13.47□□□□□ -0.25
IRF9-211ENST00000560852 MXD4Q14582 209 aaPredicted RBP13.47□□□□□ -0.25
IRF9-211ENST00000560852 PCBP1Q15365 356 aaKnown RBP eCLIP13.47□□□□□ -0.25
IRF9-211ENST00000560852 ARSHQ5FYA8 562 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 MFSD5Q6N075 450 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 RUFY4Q6ZNE9 571 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 SH3RF1Q7Z6J0 888 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 ZNF410Q86VK4 478 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 MRPS27Q92552 414 aaKnown RBP13.47□□□□□ -0.25
IRF9-211ENST00000560852 KIFAP3Q92845 792 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 TIGD1Q96MW7 591 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 LRRC27Q9C0I9 530 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 TNMDQ9H2S6 317 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 ADAMTS10Q9H324 1103 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 ATP6V0A4Q9HBG4 840 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 ODF2LQ9ULJ1 636 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 NOD1Q9Y239 953 aa13.47□□□□□ -0.25
IRF9-211ENST00000560852 IQCF3P0C7M6 154 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 PFKFB1P16118 471 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 ZNF131P52739 623 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.25
IRF9-211ENST00000560852 POLGP54098 1239 aaPredicted RBP13.46□□□□□ -0.25
IRF9-211ENST00000560852 UBE2HP62256 183 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 IGBP1P78318 339 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 GPNMBQ14956 572 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 EMC2Q15006 297 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 FMR1NBQ8N0W7 255 aaPredicted RBP13.46□□□□□ -0.25
IRF9-211ENST00000560852 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 VWCEQ96DN2 955 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 GBP4Q96PP9 640 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 MTRQ99707 1265 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 CELF4Q9BZC1 486 aaKnown RBP13.46□□□□□ -0.25
IRF9-211ENST00000560852 HIPK3Q9H422 1215 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
IRF9-211ENST00000560852 FRMD3A2A2Y4 597 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 POLR2DO15514 142 aaKnown RBP13.45□□□□□ -0.26
IRF9-211ENST00000560852 ACTN4O43707 911 aaKnown RBP13.45□□□□□ -0.26
IRF9-211ENST00000560852 CHRNA1P02708 482 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 PFKMP08237 780 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 ITGB8P26012 769 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 STAT6P42226 847 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 GPC3P51654 580 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 NDUFA8P51970 172 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 MRPS6P82932 125 aaKnown RBP13.45□□□□□ -0.26
IRF9-211ENST00000560852 AMPD3Q01432 767 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 MAPK7Q13164 816 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 SV2BQ7L1I2 683 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 DAW1Q8N136 415 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 PPP1R13LQ8WUF5 828 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
IRF9-211ENST00000560852 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
IRF9-211ENST00000560852 DNAJC19Q96DA6 116 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 MAP7D2Q96T17 732 aa13.45□□□□□ -0.26
IRF9-211ENST00000560852 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms