RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 FAM167AQ96KS9 214 aa7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 PCMTD1Q96MG8 357 aaPredicted RBP7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 NT5C3AQ9H0P0 336 aa7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 RNPEPQ9H4A4 650 aa7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 LMBRD1Q9NUN5 540 aa7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 BLOC1S4Q9NUP1 217 aa7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 SEPT9Q9UHD8 586 aaPredicted RBP7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 LTBP2Q14767 1821 aa7.86□□□□□ -1.15
CTDSPL2-210ENST00000560834 COL1A2P08123 1366 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 TRIP12Q14669 1992 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 A0A087WWV3 80 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 E9PMD0 336 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 ACTN4O43707 911 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 HBP1O60381 514 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 DKC1O60832 514 aaKnown RBP eCLIP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 CABYRO75952 493 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 TFRCP02786 760 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SMIM10L2AP0DMW4 78 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SMIM10L2BP0DMW5 78 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 LIG1P18858 919 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 EN2P19622 333 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 YWHABP31946 246 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SSTR3P32745 418 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 MCM4P33991 863 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SLC12A3P55017 1021 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 NPEPPSP55786 919 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 UBE2HP62256 183 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 ADAM17P78536 824 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SNX17Q15036 470 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 TARBP2Q15633 366 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 NBPF20Q3BBV1 942 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 XKR3Q5GH77 459 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 PADI6Q6TGC4 694 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SESTD1Q86VW0 696 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 FMR1NBQ8N0W7 255 aaPredicted RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 PDILTQ8N807 584 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SLC43A3Q8NBI5 491 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 ENGASEQ8NFI3 743 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 PIGOQ8TEQ8 1089 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 LMBR1Q8WVP7 490 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 TRAPPC12Q8WVT3 735 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 RAD54LQ92698 747 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 CALML4Q96GE6 196 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 GLT1D1Q96MS3 346 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 CTAGE1Q96RT6 745 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 PLIN2Q99541 437 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 SH2D3AQ9BRG2 576 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 NIFKQ9BYG3 293 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 STARD7Q9NQZ5 370 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 FAM13BQ9NYF5 915 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 STK17AQ9UEE5 414 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 GTF2IRD1Q9UHL9 959 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 DBR1Q9UK59 544 aaKnown RBP7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 KIAA1024Q9UPX6 916 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 ADGRG1Q9Y653 693 aa7.85□□□□□ -1.15
CTDSPL2-210ENST00000560834 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 MBLAC1A4D2B0 266 aaPredicted RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 POLR2DO15514 142 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 PRPF40AO75400 957 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 NR1I2O75469 434 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 C22orf31O95567 290 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 EYA4O95677 639 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 INSRRP14616 1297 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 CAPN2P17655 700 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 STAT6P42226 847 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 PPFIA1Q13136 1202 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 SNW1Q13573 536 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 ITGA7Q13683 1181 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 MCM6Q14566 821 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 ZRSR1Q15695 479 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 GRIK4Q16099 956 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 MTERF2Q49AM1 385 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 ARSIQ5FYB1 569 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 MARCH8Q5T0T0 291 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 GDF6Q6KF10 455 aaPredicted RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 NFRKBQ6P4R8 1299 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 CCDC73Q6ZRK6 1079 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 TRMT1LQ7Z2T5 733 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 CKAP2LQ8IYA6 745 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 TNS4Q8IZW8 715 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 KCTD17Q8N5Z5 321 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 LINC01465Q8N7H1 131 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 ZNF454Q8N9F8 522 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 RASSF8Q8NHQ8 419 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 LARP4BQ92615 738 aaKnown RBP7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 DHX58Q96C10 678 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 ZBTB10Q96DT7 871 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 CDK5RAP3Q96JB5 506 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 NACC1Q96RE7 527 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 MTRQ99707 1265 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 BHMT2Q9H2M3 363 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 C11orf49Q9H6J7 331 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 XPNPEP1Q9NQW7 623 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 CYP26B1Q9NR63 512 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 ANKEF1Q9NU02 776 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 HDAC6Q9UBN7 1215 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 CCDC39Q9UFE4 941 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 KCNH3Q9ULD8 1083 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 MYH11P35749 1972 aa7.84□□□□□ -1.15
CTDSPL2-210ENST00000560834 NRCAMQ92823 1304 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms