RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 COL1A2P08123 1366 aa12.64□□□□□ -0.39
GABPB1-210ENST00000560825 GAS7O60861 476 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 PSAPP07602 524 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 SLC26A2P50443 739 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
GABPB1-210ENST00000560825 PAK2Q13177 524 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 Q4G0T1 1027 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 FAM102BQ5T8I3 360 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 LRCH2Q5VUJ6 765 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 SMAP1Q8IYB5 467 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-210ENST00000560825 TRIM22Q8IYM9 498 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 FIBCD1Q8N539 461 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 METTL13Q8N6R0 699 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 BANK1Q8NDB2 785 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-210ENST00000560825 TNFRSF25Q93038 417 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 UHRF1Q96T88 793 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-210ENST00000560825 TSPYL2Q9H2G4 693 aaPredicted RBP12.63□□□□□ -0.39
GABPB1-210ENST00000560825 ADAMTS10Q9H324 1103 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 PLSCR2Q9NRY7 297 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 VAV3Q9UKW4 847 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 ST3GAL5Q9UNP4 418 aa12.63□□□□□ -0.39
GABPB1-210ENST00000560825 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 WDR64B1ANS9 1081 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 TNFRSF10AO00220 468 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 ZBTB39O15060 712 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 OATP04181 439 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 CTNNB1P35222 781 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 DLX2Q07687 328 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 TARBP2Q15633 366 aaKnown RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 LETM2Q2VYF4 491 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 PLA2G4FQ68DD2 849 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 EFCAB12Q6NXP0 572 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 HAS1Q92839 578 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 CLP1Q92989 425 aaKnown RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 HLA-CQ95604 372 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 MRPL38Q96DV4 380 aaKnown RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 SLKQ9H2G2 1235 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 RNF19AQ9NV58 838 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 STK36Q9NRP7 1315 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 H3BQ06 376 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 LINC01565O15544 149 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 FGFR1P11362 822 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 IRS1P35568 1242 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 BMPR1AP36894 532 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 LTBRP36941 435 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 NLRP11P59045 1033 aaKnown RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 BTG3Q14201 252 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 DSC3Q14574 896 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 NONOQ15233 471 aaKnown RBP eCLIP12.62□□□□□ -0.396e-6■□□□□ 10
GABPB1-210ENST00000560825 PIK3AP1Q6ZUJ8 805 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 ANO5Q75V66 913 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 KSR1Q8IVT5 923 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 NME8Q8N427 588 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 NSUN7Q8NE18 718 aaKnown RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 RIT2Q99578 217 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 KIF2CQ99661 725 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 ADAM2Q99965 735 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 TEKT3Q9BXF9 490 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 UBE2ZQ9H832 354 aaPredicted RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 KCNMB3Q9NPA1 279 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 LMCD1Q9NZU5 365 aa12.62□□□□□ -0.39
GABPB1-210ENST00000560825 DDX25Q9UHL0 483 aaKnown RBP12.62□□□□□ -0.39
GABPB1-210ENST00000560825 NCOR1O75376 2440 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 C9IYK1 514 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 C5orf67F2Z3F1 127 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 RPS6KA5O75582 802 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 ITGB1P05556 798 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 PRR29P0C7W0 189 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 IL9P15248 144 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 KCNA5P22460 613 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 RBM10P98175 930 aaKnown RBP12.61□□□□□ -0.39
GABPB1-210ENST00000560825 MTERF2Q49AM1 385 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 MCTP2Q6DN12 878 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 LRRC55Q6ZSA7 311 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 MIER3Q7Z3K6 550 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 ADGRD2Q7Z7M1 963 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 SYMPKQ92797 1274 aaKnown RBP12.61□□□□□ -0.39
GABPB1-210ENST00000560825 GTF3C6Q969F1 213 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 RGS18Q9NS28 235 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 ORC3Q9UBD5 711 aaPredicted RBP12.61□□□□□ -0.39
GABPB1-210ENST00000560825 SQORQ9Y6N5 450 aa12.61□□□□□ -0.39
GABPB1-210ENST00000560825 A0A087WWV3 80 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 M0QZ92 97 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 PBX3P40426 434 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 GPC3P51654 580 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 NEK4P51957 841 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 CRYBB1P53674 252 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-210ENST00000560825 NPEPPSP55786 919 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 ANAPC15P60006 121 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 SPIRE1Q08AE8 756 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 HYAL1Q12794 435 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 NPAS4Q8IUM7 802 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-210ENST00000560825 RGL1Q9NZL6 768 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 SEPT9Q9UHD8 586 aaPredicted RBP12.6□□□□□ -0.39
GABPB1-210ENST00000560825 AKT3Q9Y243 479 aa12.6□□□□□ -0.39
GABPB1-210ENST00000560825 MEIS3P2A8K0S8 358 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms