RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 DNA2P51530 1060 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 RAB30Q15771 203 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 DUSP28Q4G0W2 176 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 CST9Q5W186 159 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 COPS5Q92905 334 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 PRDM10Q9NQV6 1147 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 RBPJLQ9UBG7 517 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 SERTAD1Q9UHV2 236 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 CTNND2Q9UQB3 1225 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 EMSYQ7Z589 1322 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 CNTNAP1P78357 1384 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 SETD1AO15047 1707 aaKnown RBP10.54□□□□□ -0.72
TRPM1-212ENST00000560801 RGPD1P0DJD0 1748 aa10.54□□□□□ -0.72
TRPM1-212ENST00000560801 POTECB2RU33 542 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 KLRC2P26717 231 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ORC2Q13416 577 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-212ENST00000560801 PPM1KQ8N3J5 372 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 PLVAPQ9BX97 442 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 EMILIN2Q9BXX0 1053 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 TRPV2Q9Y5S1 764 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 STK36Q9NRP7 1315 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 POTEFA5A3E0 1075 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 PEX10O60683 326 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 SEC24BO95487 1268 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ITGBL1O95965 494 aaPredicted RBP10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ADAM9Q13443 819 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ZNF667Q5HYK9 610 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 POTEGQ6S5H5 508 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 POTEEQ6S8J3 1075 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 CCDC113Q9H0I3 377 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 CERS4Q9HA82 394 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 BTBD7Q9P203 1132 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 KANSL3Q9P2N6 904 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 MAD2L2Q9UI95 211 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 CCL14Q16627 93 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ARHGAP44Q17R89 818 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ARHGAP15Q53QZ3 475 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 SIX6OS1Q8N1H7 587 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 ARNTL2Q8WYA1 636 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 METTL14Q9HCE5 456 aaKnown RBP10.53□□□□□ -0.72
TRPM1-212ENST00000560801 POLD4Q9HCU8 107 aa10.53□□□□□ -0.72
TRPM1-212ENST00000560801 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.53□□□□□ -0.72
TRPM1-212ENST00000560801 GOLGA8IPA6NC78 632 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 GOLGA8JA6NMD2 632 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 TBX3O15119 743 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 VTNP04004 478 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 LGALS2P05162 132 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 ALDH1A3P47895 512 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 PAK1Q13153 545 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 ARL6IP4Q66PJ3 421 aaKnown RBP10.52□□□□□ -0.72
TRPM1-212ENST00000560801 PLA2G4FQ68DD2 849 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 TRIM50Q86XT4 487 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 ATP8B4Q8TF62 1192 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 DIS3Q9Y2L1 958 aaKnown RBP10.52□□□□□ -0.72
TRPM1-212ENST00000560801 LRRC37A3O60309 1634 aa10.52□□□□□ -0.72
TRPM1-212ENST00000560801 SGPL1O95470 568 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 TAL1P17542 331 aaPredicted RBP10.52□□□□□ -0.73
TRPM1-212ENST00000560801 MRPS9P82933 396 aaKnown RBP10.52□□□□□ -0.73
TRPM1-212ENST00000560801 C8orf34Q49A92 452 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 REPS2Q8NFH8 660 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 SYCE3A1L190 88 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 ZNF202O95125 648 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 GNA14O95837 355 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 SELPP16109 830 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 TNFAIP3P21580 790 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 UBXN1Q04323 297 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 TROAPQ12815 778 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 RNF219Q5W0B1 726 aaPredicted RBP10.52□□□□□ -0.73
TRPM1-212ENST00000560801 SH3BP5LQ7L8J4 393 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 APPL2Q8NEU8 664 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 USP28Q96RU2 1077 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 CSRNP2Q9H175 543 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 RANBP17Q9H2T7 1088 aaKnown RBP10.52□□□□□ -0.73
TRPM1-212ENST00000560801 KIAA1586Q9HCI6 787 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 TUFT1Q9NNX1 390 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 NRCAMQ92823 1304 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 SYNJ2BP-COX16A0A087WUM0 186 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 CCP110O43303 1012 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 TM4SF4P48230 202 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 RAB27AP51159 221 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 ACLYP53396 1101 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 ELAVL2Q12926 359 aaKnown RBP10.52□□□□□ -0.73
TRPM1-212ENST00000560801 STOX1Q6ZVD7 989 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 FTHL17Q9BXU8 183 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 COX16Q9P0S2 106 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 GABRQQ9UN88 632 aa10.52□□□□□ -0.73
TRPM1-212ENST00000560801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.52□□□□□ -0.73
TRPM1-212ENST00000560801 E9PMD0 336 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 B3GAT3O94766 335 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 ACRP10323 421 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 PLCG1P19174 1290 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 GPC3P51654 580 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 CLIC2O15247 247 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 HS1BP3Q53T59 392 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 RYBPQ8N488 228 aaPredicted RBP10.51□□□□□ -0.73
TRPM1-212ENST00000560801 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 ADAM2Q99965 735 aa10.51□□□□□ -0.73
TRPM1-212ENST00000560801 MAK16Q9BXY0 300 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms