RNA–Protein interactions for RNA: ENST00000560673.1

KNSTRN-211, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 2

Gene KNSTRN, Length 623 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-211ENST00000560673 GDF9O60383 454 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 N4BP1O75113 896 aaKnown RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 FGFR1P11362 822 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 NFX1Q12986 1120 aaKnown RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 LPAL2Q16609 132 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 SLC24A5Q71RS6 500 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 STAMQ92783 540 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 FAM126AQ9BYI3 521 aaPredicted RBP13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 ATP6V0A4Q9HBG4 840 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 IGSF10Q6WRI0 2623 aa13.17□□□□□ -0.3
KNSTRN-211ENST00000560673 KANSL1LA0AUZ9 987 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 CCND2P30279 289 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 MAGEA9P43362 315 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 TMEM62Q0P6H9 643 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 PGM5Q15124 567 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 CSRP2Q16527 193 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 TMEM266Q2M3C6 531 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 GPATCH4Q5T3I0 446 aaKnown RBP13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 C15orf39Q6ZRI6 1047 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 ADAM2Q99965 735 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 TMEM117Q9H0C3 514 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 SLC2A4RGQ9NR83 387 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 RGS18Q9NS28 235 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 EPS15L1Q9UBC2 864 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 LAMA5O15230 3695 aa13.16□□□□□ -0.3
KNSTRN-211ENST00000560673 MIA3Q5JRA6 1907 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 AKAP13Q12802 2813 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 M0R2C6 588 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 RNF113AO15541 343 aaKnown RBP13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 MGEA5O60502 916 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 SNHG28P0DPA3 235 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 HSD17B4P51659 736 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 GIT2Q14161 759 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 UBXN2BQ14CS0 331 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 GNPTABQ3T906 1256 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 MARCH8Q5T0T0 291 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 TSSK4Q6SA08 328 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 LRRC55Q6ZSA7 311 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 STOX1Q6ZVD7 989 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 LRRC43Q8N309 656 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 CELF5Q8N6W0 485 aaKnown RBP13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 IL31RAQ8NI17 732 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 ZFP91Q96JP5 570 aaPredicted RBP13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 CELF4Q9BZC1 486 aaKnown RBP13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 OSBPL6Q9BZF3 934 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 TMEM161AQ9NX61 479 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
KNSTRN-211ENST00000560673 C9IYK1 514 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 HOXA2O43364 376 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 ZFYP08048 801 aaPredicted RBP13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 GOLGA8HP0CJ92 632 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 IGBP1P78318 339 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 SP4Q02446 784 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 SLC39A11Q8N1S5 342 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 KBTBD3Q8NAB2 608 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 CASD1Q96PB1 797 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 MYL10Q9BUA6 226 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 CPVLQ9H3G5 476 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 IRAK3Q9Y616 596 aa13.14□□□□□ -0.31
KNSTRN-211ENST00000560673 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 FAM170BA6NMN3 283 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 MARK3P27448 753 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 NRLP54845 237 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 SNW1Q13573 536 aaKnown RBP13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 ODR4Q5SWX8 454 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 PRR23BQ6ZRT6 265 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 ABI1Q8IZP0 508 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 AUTS2Q8WXX7 1259 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 KIF12Q96FN5 646 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 TMEM169Q96HH4 297 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 ZBP1Q9H171 429 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 ELAC1Q9H777 363 aaKnown RBP13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 MAP3K20Q9NYL2 800 aaKnown RBP13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 ERAP1Q9NZ08 941 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 KDM3AQ9Y4C1 1321 aa13.13□□□□□ -0.31
KNSTRN-211ENST00000560673 RRN3P2A6NIE6 340 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 ORC4O43929 436 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 RPS6KA5O75582 802 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 TCF7P36402 384 aaPredicted RBP13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 LIMK1P53667 647 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 KRT76Q01546 638 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 PRKCQQ04759 706 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 QRICH1Q2TAL8 776 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 ZKSCAN2Q63HK3 967 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 ITPRIPQ8IWB1 547 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 ADGRF4Q8IZF3 695 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 ZBTB10Q96DT7 871 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 MYADMQ96S97 322 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 DDX23Q9BUQ8 820 aaKnown RBP13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 WDR6Q9NNW5 1121 aaKnown RBP13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 PRMT8Q9NR22 394 aaPredicted RBP13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
KNSTRN-211ENST00000560673 TCP11L1Q9NUJ3 509 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms