RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 IQCA1LA6NCM1 817 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 TPD52L2O43399 206 aaKnown RBP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 MYO1BO43795 1136 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 TADA3O75528 432 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 IBSPP21815 317 aaPredicted RBP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 EMC4Q5J8M3 183 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 TMED8Q6PL24 325 aaPredicted RBP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 C16orf86Q6ZW13 317 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 HDGFL2Q7Z4V5 671 aaPredicted RBP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 HOMER1Q86YM7 354 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 TCP11L2Q8N4U5 519 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 LINC00482Q8N8I6 264 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 ZSWIM2Q8NEG5 633 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 ZCRB1Q8TBF4 217 aaKnown RBP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 ZBTB8AQ96BR9 441 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 RUNDC1Q96C34 613 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 PLEKHF1Q96S99 279 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 ZNF652Q9Y2D9 606 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 CD2APQ9Y5K6 639 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 NSD2O96028 1365 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 COL3A1P02461 1466 aaPredicted RBP5.52□□□□□ -1.53
TMOD3-207ENST00000560549 SHPRHQ149N8 1683 aa5.52□□□□□ -1.53
TMOD3-207ENST00000560549 TRAV20A0A0B4J274 112 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 BCAR3O75815 825 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 ASMTLO95671 621 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 C6orf222P0C671 652 aaPredicted RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 SYN1P17600 705 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 ANAPC15P60006 121 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 RTP5Q14D33 572 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 NSMFQ6X4W1 530 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 NME9Q86XW9 330 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CCDC136Q96JN2 1154 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 MYH16Q9H6N6 1097 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 RBPJLQ9UBG7 517 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 MRPS23Q9Y3D9 190 aaKnown RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 TRAF6Q9Y4K3 522 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 TECPR2O15040 1411 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CHD2O14647 1828 aaKnown RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 NWD1Q149M9 1564 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CPSF1Q10570 1443 aaKnown RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 FAM135BQ49AJ0 1406 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 PIK3R4Q99570 1358 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 U2AF1L5P0DN76 240 aaPredicted RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CYP2C8P10632 490 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 KCNA6P17658 529 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 ITGA1P56199 1179 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 U2AF1Q01081 240 aaKnown RBP eCLIP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 ADAM9Q13443 819 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 SKOR2Q2VWA4 1001 aaPredicted RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 DALRD3Q5D0E6 543 aaKnown RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 ZFYVE27Q5T4F4 411 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 STEAP3Q658P3 488 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 STYK1Q6J9G0 422 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CD300LDQ6UXZ3 194 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 LBX2Q6XYB7 198 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 SKAP1Q86WV1 359 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 RBM12BQ8IXT5 1001 aaKnown RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CFAP53Q96M91 514 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 CLUHP3Q96NS8 147 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 FEZ1Q99689 392 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 C11orf84Q9BUA3 381 aaPredicted RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 POLKQ9UBT6 870 aa5.51□□□□□ -1.53
TMOD3-207ENST00000560549 COA3Q9Y2R0 106 aaPredicted RBP5.51□□□□□ -1.53
TMOD3-207ENST00000560549 LRRC7Q96NW7 1537 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 NKTRP30414 1462 aaKnown RBP5.5□□□□□ -1.53
TMOD3-207ENST00000560549 PPIP5K1Q6PFW1 1433 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 PNPLA6Q8IY17 1366 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 HGSO14964 777 aaPredicted RBP5.5□□□□□ -1.53
TMOD3-207ENST00000560549 CLSTN1O94985 981 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 KCNC1P48547 511 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 GYS2P54840 703 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 C21orf62-AS1Q17RA5 79 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 RNF187Q5TA31 235 aaPredicted RBP5.5□□□□□ -1.53
TMOD3-207ENST00000560549 RSPO2Q6UXX9 243 aaPredicted RBP5.5□□□□□ -1.53
TMOD3-207ENST00000560549 CARFQ8N187 725 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 PIP4K2CQ8TBX8 421 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 DCAF4Q8WV16 495 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 DHRS4Q9BTZ2 278 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 KRTAP17-1Q9BYP8 105 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 EPB41L1Q9H4G0 881 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 PRDM16Q9HAZ2 1276 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 NCOA5Q9HCD5 579 aaKnown RBP5.5□□□□□ -1.53
TMOD3-207ENST00000560549 PCDH12Q9NPG4 1184 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 TELO2Q9Y4R8 837 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 PCDHB4Q9Y5E5 795 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 COL4A3BPQ9Y5P4 624 aa5.5□□□□□ -1.53
TMOD3-207ENST00000560549 XIRP1Q702N8 1843 aaKnown RBP5.49□□□□□ -1.53
TMOD3-207ENST00000560549 TRBV23-1A0A0A0MS06 115 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 NKRFO15226 690 aaKnown RBP eCLIP5.49□□□□□ -1.53
TMOD3-207ENST00000560549 LRG1P02750 347 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 LTFP02788 710 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 THBS2P35442 1172 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 PRR31Q5SQ13 230 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 WDR63Q8IWG1 891 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 RPUSD2Q8IZ73 545 aaKnown RBP5.49□□□□□ -1.53
TMOD3-207ENST00000560549 NGEFQ8N5V2 710 aa5.49□□□□□ -1.53
TMOD3-207ENST00000560549 IFT57Q9NWB7 429 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms