RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 OGFOD3Q6PK18 319 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 NXPE1Q8N323 547 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 CBARPQ8N350 705 aaPredicted RBP7.24□□□□□ -1.25
USP8-210ENST00000560379 CRACR2BQ8N4Y2 399 aaPredicted RBP7.24□□□□□ -1.25
USP8-210ENST00000560379 ZNF507Q8TCN5 953 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 BRF1Q92994 677 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 RCC1LQ96I51 464 aaKnown RBP7.24□□□□□ -1.25
USP8-210ENST00000560379 TTC14Q96N46 770 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 MENTQ9BUN1 341 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 LRRC27Q9C0I9 530 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 LGR6Q9HBX8 967 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 CWC25Q9NXE8 425 aaPredicted RBP7.24□□□□□ -1.25
USP8-210ENST00000560379 CLIC5Q9NZA1 410 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 USP25Q9UHP3 1055 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 ADAMTS6Q9UKP5 1117 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 PPP1R9AQ9ULJ8 1098 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 SLC5A6Q9Y289 635 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 DAGLAQ9Y4D2 1042 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 TRAF6Q9Y4K3 522 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 ITGB4P16144 1822 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 LY75O60449 1722 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 NUP188Q5SRE5 1749 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 MRC1P22897 1456 aa7.24□□□□□ -1.25
USP8-210ENST00000560379 ZNF831Q5JPB2 1677 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 ZNF891A8MT65 544 aaPredicted RBP7.23□□□□□ -1.25
USP8-210ENST00000560379 PRRT4C9JH25 899 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 KCNH1O95259 989 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 MYBL2P10244 700 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 CCND1P24385 295 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 ASPAP45381 313 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 NEK3P51956 506 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 GFRA1P56159 465 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 IL2P60568 153 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 MAP4K2Q12851 820 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 PLCL1Q15111 1095 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 NKG7Q16617 165 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 ALDH1L2Q3SY69 923 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 MINDY4Q4G0A6 757 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 HP1BP3Q5SSJ5 553 aaPredicted RBP7.23□□□□□ -1.25
USP8-210ENST00000560379 FAM83BQ5T0W9 1011 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 ARHGEF39Q8N4T4 335 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 USP33Q8TEY7 942 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 CYB5D2Q8WUJ1 264 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 FUBP3Q96I24 572 aaKnown RBP eCLIP7.23□□□□□ -1.25
USP8-210ENST00000560379 ORAI3Q9BRQ5 295 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 SARGQ9BW04 601 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 RETREG1Q9H6L5 497 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 SAMD15Q9P1V8 674 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 PAPPAQ13219 1627 aa7.23□□□□□ -1.25
USP8-210ENST00000560379 SHOXO15266 292 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 SNUPNO95149 360 aaKnown RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 RRM1P23921 792 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 NTF4P34130 210 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 IARSP41252 1262 aaKnown RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 ADCYAP1R1P41586 468 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 KCNJ6P48051 423 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 ID3Q02535 119 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 PICALMQ13492 652 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 CDC37Q16543 378 aaPredicted RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 GTF2IRD2BQ6EKJ0 949 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 PDXDC1Q6P996 788 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 SPOCD1Q6ZMY3 1216 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 GTF2IRD2Q86UP8 949 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 ZSCAN30Q86W11 494 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 KIF18BQ86Y91 864 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 SMAP1Q8IYB5 467 aaPredicted RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 C7orf61Q8IZ16 206 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 PLD6Q8N2A8 252 aaKnown RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 FAM181AQ8N9Y4 354 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 TMEM145Q8NBT3 493 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 PJA1Q8NG27 643 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 GP6Q9HCN6 339 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 TCF7L1Q9HCS4 588 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 NGRNQ9NPE2 291 aaKnown RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 CGGBP1Q9UFW8 167 aaPredicted RBP7.22□□□□□ -1.25
USP8-210ENST00000560379 NUDCQ9Y266 331 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 SH3BP1Q9Y3L3 701 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 PCDHA9Q9Y5H5 950 aa7.22□□□□□ -1.25
USP8-210ENST00000560379 SIPA1L3O60292 1781 aaPredicted RBP7.21□□□□□ -1.25
USP8-210ENST00000560379 K7ESF4 209 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 TCEA3O75764 348 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 FKBP9O95302 570 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 MT-CO1P00395 513 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 SNRPB2P08579 225 aaKnown RBP7.21□□□□□ -1.26
USP8-210ENST00000560379 TGFB3P10600 412 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 PF4V1P10720 104 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 RBP3P10745 1247 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 ITGA4P13612 1032 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 CD96P40200 585 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 AUHQ13825 339 aaKnown RBP7.21□□□□□ -1.26
USP8-210ENST00000560379 GLIPR1L2Q4G1C9 344 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 AMOTQ4VCS5 1084 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 NBPF12Q5TAG4 269 aaPredicted RBP7.21□□□□□ -1.26
USP8-210ENST00000560379 ABHD17CQ6PCB6 329 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 USP53Q70EK8 1073 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 FKBP9P1Q75LS8 142 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 DDX53Q86TM3 631 aaKnown RBP7.21□□□□□ -1.26
USP8-210ENST00000560379 SUGP1Q8IWZ8 645 aaKnown RBP7.21□□□□□ -1.26
USP8-210ENST00000560379 USHBP1Q8N6Y0 703 aa7.21□□□□□ -1.26
USP8-210ENST00000560379 CCDC140Q96MF4 163 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms