RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 ITGB3BPQ13352 177 aaPredicted RBP18.96■□□□□ 0.63
HERC1-207ENST00000560316 KIZQ2M2Z5 673 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 ODR4Q5SWX8 454 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 ZNF558Q96NG5 402 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 LZTS2Q9BRK4 669 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 TMEM117Q9H0C3 514 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 ELAC1Q9H777 363 aaKnown RBP18.96■□□□□ 0.63
HERC1-207ENST00000560316 RNF19AQ9NV58 838 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 LIMD1Q9UGP4 676 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 NFASCO94856 1347 aa18.96■□□□□ 0.63
HERC1-207ENST00000560316 IGHDP01880 384 aa18.95■□□□□ 0.62
HERC1-207ENST00000560316 RXRAP19793 462 aa18.95■□□□□ 0.62
HERC1-207ENST00000560316 KRT17Q04695 432 aa18.95■□□□□ 0.62
HERC1-207ENST00000560316 DSC3Q14574 896 aa18.95■□□□□ 0.62
HERC1-207ENST00000560316 RARS2Q5T160 578 aaKnown RBP18.95■□□□□ 0.62
HERC1-207ENST00000560316 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
HERC1-207ENST00000560316 MB21D2Q8IYB1 491 aaPredicted RBP18.95■□□□□ 0.62
HERC1-207ENST00000560316 C12orf76Q8N812 135 aaPredicted RBP18.95■□□□□ 0.62
HERC1-207ENST00000560316 RWDD1Q9H446 243 aaPredicted RBP18.95■□□□□ 0.62
HERC1-207ENST00000560316 GVINP1Q7Z2Y8 2422 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 C2orf71A6NGG8 1288 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 BACH1O14867 736 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 HBP1O60381 514 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 CLASP2O75122 1294 aaKnown RBP18.94■□□□□ 0.62
HERC1-207ENST00000560316 ATG7O95352 703 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 CA8P35219 290 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 PPM1AP35813 382 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 MTHFRP42898 656 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 SMC1AQ14683 1233 aaKnown RBP18.94■□□□□ 0.62
HERC1-207ENST00000560316 MCTP2Q6DN12 878 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 FAM43BQ6ZT52 329 aaPredicted RBP18.94■□□□□ 0.62
HERC1-207ENST00000560316 CCDC82Q8N4S0 544 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 MRPL43Q8N983 215 aaKnown RBP18.94■□□□□ 0.62
HERC1-207ENST00000560316 TDRD5Q8NAT2 981 aaKnown RBP18.94■□□□□ 0.62
HERC1-207ENST00000560316 PGBD1Q96JS3 809 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 AGO4Q9HCK5 861 aaKnown RBP18.94■□□□□ 0.62
HERC1-207ENST00000560316 SPG21Q9NZD8 308 aa18.94■□□□□ 0.62
HERC1-207ENST00000560316 IGKV6D-21A0A0A0MT36 114 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 ZBTB42B2RXF5 422 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 DDX39AO00148 427 aaKnown RBP18.93■□□□□ 0.62
HERC1-207ENST00000560316 CCNE2O96020 404 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 VTNP04004 478 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 GNAQP50148 359 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 SLC26A2P50443 739 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 CLCN5P51795 746 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 CRYBB1P53674 252 aaPredicted RBP18.93■□□□□ 0.62
HERC1-207ENST00000560316 CWF19L1Q69YN2 538 aaKnown RBP18.93■□□□□ 0.62
HERC1-207ENST00000560316 RAB11FIP4Q86YS3 637 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 LRRC43Q8N309 656 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 FLCNQ8NFG4 579 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 EVPLQ92817 2033 aa18.93■□□□□ 0.62
HERC1-207ENST00000560316 PI15O43692 258 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 GPR32O75388 356 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 ZNF484Q5JVG2 852 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 ABHD15Q6UXT9 468 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 NFXL1Q6ZNB6 911 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 HEATR3Q7Z4Q2 680 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 CCDC60Q8IWA6 550 aaPredicted RBP18.92■□□□□ 0.62
HERC1-207ENST00000560316 ZDHHC14Q8IZN3 488 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 ABI1Q8IZP0 508 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 SLC39A11Q8N1S5 342 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 RNF169Q8NCN4 708 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 FEZF2Q8TBJ5 459 aa18.92■□□□□ 0.62
HERC1-207ENST00000560316 DBR1Q9UK59 544 aaKnown RBP18.92■□□□□ 0.62
HERC1-207ENST00000560316 WDR87Q6ZQQ6 2873 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 HOXA2O43364 376 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 C22orf31O95567 290 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 ATP4AP20648 1035 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 CEP55Q53EZ4 464 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 FAM160B1Q5W0V3 765 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 PDXDC2PQ6P474 469 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 TRMT1LQ7Z2T5 733 aaKnown RBP18.91■□□□□ 0.62
HERC1-207ENST00000560316 METTL13Q8N6R0 699 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 ZNF302Q9NR11 478 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 COL1A2P08123 1366 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 CACNA1AO00555 2505 aa18.91■□□□□ 0.62
HERC1-207ENST00000560316 NT5C1B-RDH14C9J2C7 533 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 CXCL14O95715 111 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 GSPT1P15170 499 aaKnown RBP18.9■□□□□ 0.62
HERC1-207ENST00000560316 METAP2P50579 478 aaKnown RBP eCLIP18.9■□□□□ 0.62
HERC1-207ENST00000560316 CLLU1OSQ5K130 101 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 ATAT1Q5SQI0 421 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 KIAA1841Q6NSI8 718 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 CASC1Q6TDU7 716 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 ECHDC2Q86YB7 292 aa18.9■□□□□ 0.62
HERC1-207ENST00000560316 CCDC69A6NI79 296 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 PRC1O43663 620 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 EOMESO95936 686 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 EPCAMP16422 314 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 NPR3P17342 541 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 ANGPT1Q15389 498 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 SWSAP1Q6NVH7 229 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 CKAP2LQ8IYA6 745 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 PLCD3Q8N3E9 789 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 HELQQ8TDG4 1101 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 AUTS2Q8WXX7 1259 aa18.89■□□□□ 0.61
HERC1-207ENST00000560316 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.88■□□□□ 0.61
HERC1-207ENST00000560316 MEIS1O00470 390 aa18.88■□□□□ 0.61
HERC1-207ENST00000560316 SH2B2O14492 632 aaPredicted RBP18.88■□□□□ 0.61
HERC1-207ENST00000560316 ZSCAN20P17040 1043 aaPredicted RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms