RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 SMIM23A6NLE4 172 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 DAPK3O43293 454 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 VHLP40337 213 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 SLC4A8Q2Y0W8 1093 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 ZC2HC1CQ53FD0 456 aaPredicted RBP20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 CCDC80Q76M96 950 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 FAM13CQ8NE31 585 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 FAM114A2Q9NRY5 505 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 ANGEL1Q9UNK9 670 aaKnown RBP20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 ATP8A1Q9Y2Q0 1164 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 GJB6O95452 261 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 ETS2P15036 469 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 BTG3Q14201 252 aaPredicted RBP20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 CCDC152Q4G0S7 254 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 TCERG1LQ5VWI1 586 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 CLEC4GQ6UXB4 293 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 MIGA2Q7L4E1 593 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 HAPLN3Q96S86 360 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 TUBGCP2Q9BSJ2 902 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 TXLNGQ9NUQ3 528 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 TAF1LQ8IZX4 1826 aa20.71■□□□□ 0.91
SEMA4B-215ENST00000560089 LCA5LO95447 670 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 SH3BGRP55822 239 aaPredicted RBP20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 SSRP1Q08945 709 aaKnown RBP20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 NR5A1Q13285 461 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 KCTD19Q17RG1 926 aaPredicted RBP20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 TTC8Q8TAM2 541 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 ZNF653Q96CK0 615 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 TRIM47Q96LD4 638 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 MTA3Q9BTC8 594 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 TMOD4Q9NZQ9 345 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 STOML1Q9UBI4 398 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 STK36Q9NRP7 1315 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 TCP11X1B4DZS4 312 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 EHHADHQ08426 723 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 TMED1Q13445 227 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 CCDC6Q16204 474 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 NCCRP1Q6ZVX7 275 aaPredicted RBP20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 TBC1D16Q8TBP0 767 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 ABTB1Q969K4 478 aaPredicted RBP20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 CLMNQ96JQ2 1002 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.7■□□□□ 0.92e-6■■■■■ 30.2
SEMA4B-215ENST00000560089 AZI2Q9H6S1 392 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 PLAGL2Q9UPG8 496 aa20.7■□□□□ 0.9
SEMA4B-215ENST00000560089 RGS16O15492 202 aaPredicted RBP20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 TMC4Q7Z404 712 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 LRRC8CQ8TDW0 803 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 TMEM59LQ9UK28 342 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 TMEM98Q9Y2Y6 226 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 ECM29Q5VYK3 1845 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 A0A1W2PQJ5 194 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 CIAO1O76071 339 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 CYP1A1P04798 512 aaPredicted RBP20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 IFI35P80217 286 aaPredicted RBP20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 NTRK3Q16288 839 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 APOA5Q6Q788 366 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 AGGF1Q8N302 714 aaeCLIP20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 STAG2Q8N3U4 1231 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 GATA6Q92908 595 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 RMDN2Q96LZ7 410 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 FOXP1Q9H334 677 aaPredicted RBP20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 MYH3P11055 1940 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 COL4A1P02462 1669 aa20.69■□□□□ 0.9
SEMA4B-215ENST00000560089 WTIPA6NIX2 430 aaPredicted RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 SIGLEC16A6NMB1 481 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 RNF113AO15541 343 aaKnown RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 AFPP02771 609 aaKnown RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 ZFXP17010 805 aaPredicted RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 RASA1P20936 1047 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 PMS1P54277 932 aaKnown RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 PLOD1Q02809 727 aaPredicted RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 PRPF4BQ13523 1007 aaKnown RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 LENG1Q96BZ8 264 aaPredicted RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 PGM2Q96G03 612 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 FAM81BQ96LP2 452 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 CCDC113Q9H0I3 377 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 CABP5Q9NP86 173 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 SH3GLB1Q9Y371 365 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 GOLGA8AA7E2F4 631 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 STKLD1Q8NE28 680 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 TAF4BQ92750 862 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 AGAP3Q96P47 875 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 TAF1P21675 1872 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 ZBTB43O43298 467 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 ASLP04424 464 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 ALOX15P16050 662 aaPredicted RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 SLC1A4P43007 532 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 INF2Q27J81 1249 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 OLFML2BQ68BL8 750 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 SLC51AQ86UW1 340 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 SLF2Q8IX21 1173 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 WDR60Q8WVS4 1066 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 SCG3Q8WXD2 468 aaKnown RBP20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 MIS12Q9H081 205 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 BRD8Q9H0E9 1235 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 LRMDAQ9H2I8 198 aa20.68■□□□□ 0.9
SEMA4B-215ENST00000560089 ZNF831Q5JPB2 1677 aa20.67■□□□□ 0.9
SEMA4B-215ENST00000560089 RIC1Q4ADV7 1423 aa20.67■□□□□ 0.9
SEMA4B-215ENST00000560089 GTPBP6O43824 516 aaPredicted RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms