RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 INPP5BP32019 993 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 JAM2P57087 298 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 MCCD1P59942 119 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 GFPT1Q06210 699 aaPredicted RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 MAPK7Q13164 816 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 GLE1Q53GS7 698 aaKnown RBP8.85□□□□□ -0.99
SMAD3-212ENST00000559937 IRF2BP2Q7Z5L9 587 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 FAM178BQ8IXR5 827 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 RDM1Q8NG50 284 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 PIGOQ8TEQ8 1089 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 CLEC4DQ8WXI8 215 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 JDP2Q8WYK2 163 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 HOOK2Q96ED9 719 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 UIMC1Q96RL1 719 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 LXNQ9BS40 222 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 CRACR2AQ9BSW2 395 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 TLR10Q9BXR5 811 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 ZNF341Q9BYN7 854 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 ST6GALNAC4Q9H4F1 302 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 SIX2Q9NPC8 291 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 MED4Q9NPJ6 270 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 TBC1D22BQ9NU19 505 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 NENFQ9UMX5 172 aa8.85□□□□□ -0.99
SMAD3-212ENST00000559937 SIP14410 1827 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 A0A087X0T9 212 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 P4HA2O15460 535 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 DHX15O43143 795 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 N4BP1O75113 896 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 FLOT1O75955 427 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 TFRCP02786 760 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 CCDC172P0C7W6 258 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 FAM228BP0C875 321 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 SLC9A1P19634 815 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 NMT1P30419 496 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 STAT1P42224 750 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 AARSP49588 968 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 JAK3P52333 1124 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 NPEPPSP55786 919 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 RASSF7Q02833 373 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 RASA3Q14644 834 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 CASP8Q14790 479 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 ZYXQ15942 572 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 TKFCQ3LXA3 575 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 ODR4Q5SWX8 454 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 CCDC181Q5TID7 509 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 DCAF15Q66K64 600 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 MIGA2Q7L4E1 593 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 FAM133AQ8N9E0 248 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 HVCN1Q96D96 273 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 CAPZA3Q96KX2 299 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 TEPSINQ96N21 525 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 IWS1Q96ST2 819 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 TAOK3Q9H2K8 898 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 TMEM206Q9H813 350 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 SLC38A10Q9HBR0 1119 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 AGO4Q9HCK5 861 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 AGPAT3Q9NRZ7 376 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 ANKEF1Q9NU02 776 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 FBXO28Q9NVF7 368 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 PSD3Q9NYI0 1048 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 GCNT4Q9P109 453 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 LARSQ9P2J5 1176 aaKnown RBP8.84□□□□□ -0.99
SMAD3-212ENST00000559937 PPP1R9AQ9ULJ8 1098 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 FRMD4BQ9Y2L6 1034 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 CEP350Q5VT06 3117 aa8.84□□□□□ -0.99
SMAD3-212ENST00000559937 LCTP09848 1927 aa8.84□□□□□ -1
SMAD3-212ENST00000559937 A0A0G2JMZ2 1700 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 PDE2AO00408 941 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 CLIC2O15247 247 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 PMM2O15305 246 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 CHMP2AO43633 222 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 SRGAP2O75044 1071 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 ZBED4O75132 1171 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 HIP1RO75146 1068 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 ITGB5P18084 799 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 KLRC1P26715 233 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 SFNP31947 248 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 QARSP47897 775 aaKnown RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 FMO5P49326 533 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 CASP4P49662 377 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 OAZ1P54368 228 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 UBXN2AP68543 259 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 KRT76Q01546 638 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 KIAA0753Q2KHM9 967 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 NBPF9Q3BBW0 867 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 CFAP221Q4G0U5 840 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 DALRD3Q5D0E6 543 aaKnown RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 DCAF17Q5H9S7 520 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 MEI1Q5TIA1 1274 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 TCERG1LQ5VWI1 586 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 PADI6Q6TGC4 694 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 CCNI2Q6ZMN8 369 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 ZNF771Q7L3S4 317 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 C4orf19Q8IY42 314 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 DAW1Q8N136 415 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 SPATA4Q8NEY3 305 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 FAM71BQ8TC56 605 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 SYTL5Q8TDW5 730 aaPredicted RBP8.83□□□□□ -1
SMAD3-212ENST00000559937 LMBR1Q8WVP7 490 aa8.83□□□□□ -1
SMAD3-212ENST00000559937 CALR3Q96L12 384 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms