RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 IKBKBO14920 756 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 HBP1O60381 514 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 ZNF286BP0CG31 522 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 PPP1R2P41236 205 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 CPT1AP50416 773 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 AOPEPQ8N6M6 819 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 SLAIN1Q8ND83 568 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 MCPH1Q8NEM0 835 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 DRC1Q96MC2 740 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 MED15Q96RN5 788 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 RNPEPQ9H4A4 650 aa13.5□□□□□ -0.25
HERC1-205ENST00000559886 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
HERC1-205ENST00000559886 ZBTB42B2RXF5 422 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 H3BRB1 525 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 CNGA1P29973 690 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 RFC5P40937 340 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 STIM1Q13586 685 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 UVSSAQ2YD98 709 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 KLHL10Q6JEL2 608 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 MAEAQ7L5Y9 396 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 GUF1Q8N442 669 aaKnown RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 MYCT1Q8N699 235 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 TUT1Q9H6E5 874 aaKnown RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 ATP6V0A4Q9HBG4 840 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 TRIM17Q9Y577 477 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 EVPLQ92817 2033 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 BECN2A8MW95 431 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 CCND3P30281 292 aaPredicted RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 POLGP54098 1239 aaPredicted RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 GJA9P57773 515 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 IRX5P78411 483 aaPredicted RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 NCAPHQ15003 741 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 BRDTQ58F21 947 aaPredicted RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 GLIS3Q8NEA6 775 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 ENOX1Q8TC92 643 aaKnown RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 DHTKD1Q96HY7 919 aaPredicted RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 UPF3AQ9H1J1 476 aaKnown RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 GPRC5CQ9NQ84 441 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 LARSQ9P2J5 1176 aaKnown RBP13.49□□□□□ -0.25
HERC1-205ENST00000559886 TRPC6Q9Y210 931 aa13.49□□□□□ -0.25
HERC1-205ENST00000559886 SMTNL1A8MU46 457 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 PSMA7O14818 248 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 RARBP10826 455 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 NKX3-2P78367 333 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 MYL5Q02045 173 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 PAK1Q13153 545 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 EMC2Q15006 297 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 FSCN1Q16658 493 aaKnown RBP13.48□□□□□ -0.25
HERC1-205ENST00000559886 ODR4Q5SWX8 454 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 FAM102BQ5T8I3 360 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 SLC7A3Q8WY07 619 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 KIFAP3Q92845 792 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 FIZ1Q96SL8 496 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 MRPL44Q9H9J2 332 aaKnown RBP13.48□□□□□ -0.25
HERC1-205ENST00000559886 RWDD2AQ9UIY3 292 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 CTNND2Q9UQB3 1225 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 MAFO75444 373 aaPredicted RBP13.48□□□□□ -0.25
HERC1-205ENST00000559886 F2P00734 622 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 PLS3P13797 630 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 LRRC41Q15345 812 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 EPM2AIP1Q7L775 607 aaPredicted RBP13.48□□□□□ -0.25
HERC1-205ENST00000559886 EXOC8Q8IYI6 725 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 MYOCDQ8IZQ8 938 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 C17orf75Q9HAS0 396 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 PTCH2Q9Y6C5 1203 aa13.48□□□□□ -0.25
HERC1-205ENST00000559886 SYNRGQ9UMZ2 1314 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 GOLGA6L19H0YKK7 550 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 GRK4P32298 578 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 CASP5P51878 434 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 RTP1P59025 263 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 BEX3Q00994 111 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 TBC1D8BQ0IIM8 1120 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 ZNF484Q5JVG2 852 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 FAM178BQ8IXR5 827 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 SCFD1Q8WVM8 642 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 KAT2BQ92831 832 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 INHAP05111 366 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 C6orf222P0C671 652 aaPredicted RBP13.47□□□□□ -0.25
HERC1-205ENST00000559886 MAPTP10636 758 aaKnown RBP13.47□□□□□ -0.25
HERC1-205ENST00000559886 INSRRP14616 1297 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 SOX10P56693 466 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 L1TD1Q5T7N2 865 aaKnown RBP13.47□□□□□ -0.25
HERC1-205ENST00000559886 ZNF720Q7Z2F6 126 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 SPC25Q9HBM1 224 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 COL1A2P08123 1366 aa13.47□□□□□ -0.25
HERC1-205ENST00000559886 IGKV6-21A0A0C4DH24 114 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 MYADML2A6NDP7 307 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 GAS2O43903 313 aaKnown RBP13.46□□□□□ -0.25
HERC1-205ENST00000559886 KPNA6O60684 536 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 KIF20AO95235 890 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 CCNE1P24864 410 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
HERC1-205ENST00000559886 STX17P56962 302 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 SPATA1Q5VX52 437 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 CENPPQ6IPU0 288 aa13.46□□□□□ -0.25
HERC1-205ENST00000559886 P2RX5Q93086 422 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms