RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 STK25O00506 426 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 HOXA2O43364 376 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 PI15O43692 258 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 PLEKHA8P1O95397 391 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 ARP10275 920 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 RFX1P22670 979 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 KIF5BP33176 963 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 METAP2P50579 478 aaKnown RBP eCLIP12.31□□□□□ -0.44
TRAF3-207ENST00000559734 HDAC1Q13547 482 aaPredicted RBP12.31□□□□□ -0.44
TRAF3-207ENST00000559734 ATAT1Q5SQI0 421 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 KIAA1841Q6NSI8 718 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 PLPPR4Q7Z2D5 763 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 TRMT1LQ7Z2T5 733 aaKnown RBP12.31□□□□□ -0.44
TRAF3-207ENST00000559734 CCDC105Q8IYK2 499 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 KIAA2013Q8IYS2 634 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 ZDHHC14Q8IZN3 488 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 CMTR1Q8N1G2 835 aaKnown RBP12.31□□□□□ -0.44
TRAF3-207ENST00000559734 PLCD3Q8N3E9 789 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
TRAF3-207ENST00000559734 RMDN1Q96DB5 314 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 CASD1Q96PB1 797 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 SPZ1Q9BXG8 430 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 IL25Q9H293 177 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 KCNH7Q9NS40 1196 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 MYO15AQ9UKN7 3530 aa12.31□□□□□ -0.44
TRAF3-207ENST00000559734 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.3□□□□□ -0.44
TRAF3-207ENST00000559734 hCG_1642624A0A1W2PR95 340 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 MAFGO15525 162 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 HBP1O60381 514 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 EOMESO95936 686 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 VTNP04004 478 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 EPCAMP16422 314 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 AOC1P19801 751 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 BMS1Q14692 1282 aaKnown RBP12.3□□□□□ -0.44
TRAF3-207ENST00000559734 TMC5Q6UXY8 1006 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 PLEKHM2Q8IWE5 1019 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 KIAA0319LQ8IZA0 1049 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 ZNF654Q8IZM8 581 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 SIX5Q8N196 739 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 SLC39A11Q8N1S5 342 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 METTL13Q8N6R0 699 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 DTWD2Q8NBA8 298 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 AUTS2Q8WXX7 1259 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 PGBD1Q96JS3 809 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 ELAC1Q9H777 363 aaKnown RBP12.3□□□□□ -0.44
TRAF3-207ENST00000559734 RNF19AQ9NV58 838 aa12.3□□□□□ -0.44
TRAF3-207ENST00000559734 CXCL14O95715 111 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
TRAF3-207ENST00000559734 CYP21A2P08686 494 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 ZSCAN20P17040 1043 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-207ENST00000559734 RXRAP19793 462 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 CRYBB1P53674 252 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-207ENST00000559734 FAM160B1Q5W0V3 765 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 PDXDC2PQ6P474 469 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 NFXL1Q6ZNB6 911 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 HEATR3Q7Z4Q2 680 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 CHD1LQ86WJ1 897 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 RAB11FIP4Q86YS3 637 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 CKAP2LQ8IYA6 745 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 RIN2Q8WYP3 895 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-207ENST00000559734 ACSF2Q96CM8 615 aaPredicted RBP12.29□□□□□ -0.44
TRAF3-207ENST00000559734 TMEM169Q96HH4 297 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 RTP3Q9BQQ7 232 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 MXRA8Q9BRK3 442 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 CYP26B1Q9NR63 512 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 DZANK1Q9NVP4 752 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 TAF6LQ9Y6J9 622 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 R4GN57 208 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 SPTBN4Q9H254 2564 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 FAM186AA6NE01 2351 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 NFASCO94856 1347 aa12.29□□□□□ -0.44
TRAF3-207ENST00000559734 E7EWF7 191 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 DDAH1O94760 285 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 NPR3P17342 541 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 SLC26A2P50443 739 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 FAM189BP81408 668 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 ITGB3BPQ13352 177 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-207ENST00000559734 DSC3Q14574 896 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 CCDC149Q6ZUS6 474 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 CABP7Q86V35 215 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 ECHDC2Q86YB7 292 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 CCDC60Q8IWA6 550 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-207ENST00000559734 VPS52Q8N1B4 723 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 CCDC82Q8N4S0 544 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 SRBD1Q8N5C6 995 aaKnown RBP12.28□□□□□ -0.44
TRAF3-207ENST00000559734 FEZF2Q8TBJ5 459 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 HELQQ8TDG4 1101 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 ZNF668Q96K58 619 aaPredicted RBP12.28□□□□□ -0.44
TRAF3-207ENST00000559734 LZTS2Q9BRK4 669 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 AGO4Q9HCK5 861 aaKnown RBP12.28□□□□□ -0.44
TRAF3-207ENST00000559734 ZNF302Q9NR11 478 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 AKT3Q9Y243 479 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 USTQ9Y2C2 406 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 COL1A2P08123 1366 aa12.28□□□□□ -0.44
TRAF3-207ENST00000559734 RIF1Q5UIP0 2472 aaKnown RBP12.27□□□□□ -0.45
TRAF3-207ENST00000559734 ZC3H11AO75152 810 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRAF3-207ENST00000559734 CCNE2O96020 404 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms