RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 ZNF484Q5JVG2 852 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 KRT79Q5XKE5 535 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 HAUS3Q68CZ6 603 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 CLEC17AQ6ZS10 378 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 CABP7Q86V35 215 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 CKAP2LQ8IYA6 745 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 KIAA0319LQ8IZA0 1049 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 FAM167AQ96KS9 214 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 HTATIP2Q9BUP3 242 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 NOC4LQ9BVI4 516 aaKnown RBP10.11□□□□□ -0.79
HMG20A-209ENST00000559728 WNT8AQ9H1J5 351 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 DHX33Q9H6R0 707 aaKnown RBP10.11□□□□□ -0.79
HMG20A-209ENST00000559728 CYP26B1Q9NR63 512 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 NRBP2Q9NSY0 501 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 ANKEF1Q9NU02 776 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 DDX19AQ9NUU7 478 aaKnown RBP10.11□□□□□ -0.79
HMG20A-209ENST00000559728 KIAA1024Q9UPX6 916 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 PCDHA2Q9Y5H9 948 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 COL1A2P08123 1366 aa10.11□□□□□ -0.79
HMG20A-209ENST00000559728 TNRC18O15417 2968 aaPredicted RBP10.11□□□□□ -0.79
HMG20A-209ENST00000559728 FAM237AA0A1B0GTK4 181 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 MAFO75444 373 aaPredicted RBP10.1□□□□□ -0.79
HMG20A-209ENST00000559728 CLTBP09497 229 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 XRCC6P12956 609 aaKnown RBP eCLIP10.1□□□□□ -0.79
HMG20A-209ENST00000559728 PLCG1P19174 1290 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 MGAT3Q09327 533 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 MBTPS1Q14703 1052 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 E2F4Q16254 413 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 MTERF2Q49AM1 385 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 RESP18Q5W5W9 173 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 C7orf61Q8IZ16 206 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 ERMNQ8TAM6 284 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 SPATA32Q96LK8 384 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 NACC1Q96RE7 527 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 PLIN2Q99541 437 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 MTRQ99707 1265 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 RAB34Q9BZG1 259 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 SCAND2PQ9GZW5 306 aaPredicted RBP10.1□□□□□ -0.79
HMG20A-209ENST00000559728 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
HMG20A-209ENST00000559728 TUBE1Q9UJT0 475 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 DBR1Q9UK59 544 aaKnown RBP10.1□□□□□ -0.79
HMG20A-209ENST00000559728 HPSEQ9Y251 543 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 ATP6V1DQ9Y5K8 247 aa10.1□□□□□ -0.79
HMG20A-209ENST00000559728 MROH7Q68CQ1 1323 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 SMIM35A0A1B0GVV1 85 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 DCDC2CA8MYV0 355 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 SLC26A4O43511 780 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 DKC1O60832 514 aaKnown RBP eCLIP10.09□□□□□ -0.79
HMG20A-209ENST00000559728 EYA4O95677 639 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 NCLP19338 710 aaKnown RBP10.09□□□□□ -0.79
HMG20A-209ENST00000559728 UBA7P41226 1012 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 ME1P48163 572 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 SLC12A3P55017 1021 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 ARSHQ5FYA8 562 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 ADALQ6DHV7 355 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 DAW1Q8N136 415 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 LRRC71Q8N4P6 559 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 TMEM87AQ8NBN3 555 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 CEP170P1Q96L14 293 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 GOLPH3LQ9H4A5 285 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 TMEM39AQ9NV64 488 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 ALPK3Q96L96 1907 aa10.09□□□□□ -0.79
HMG20A-209ENST00000559728 A0A1W2PQ27 194 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 A0A1W2PQ64 194 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 A0A1W2PQD8 194 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 SNPHO15079 494 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 TLR3O15455 904 aaKnown RBP10.08□□□□□ -0.8
HMG20A-209ENST00000559728 EVI5O60447 810 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 GPR32O75388 356 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 TIMP1P01033 207 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 CHRNA1P02708 482 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 GNAT1P11488 350 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 CKBP12277 381 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 SYN1P17600 705 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 CMA1P23946 247 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 CYP2C18P33260 490 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 CLCN3P51790 818 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 MAPK7Q13164 816 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 TCTN1Q2MV58 587 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 XKR9Q5GH70 373 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 FAM26DQ5JW98 314 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 ZNF618Q5T7W0 954 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 RINT1Q6NUQ1 792 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 EFCAB12Q6NXP0 572 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 TAF2Q6P1X5 1199 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 C1orf186Q6ZWK4 172 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 ZNF710Q8N1W2 664 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 KCTD17Q8N5Z5 321 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 SYT2Q8N9I0 419 aaPredicted RBP10.08□□□□□ -0.8
HMG20A-209ENST00000559728 DNAJB3Q8WWF6 145 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 RUSC1Q9BVN2 902 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 PANK2Q9BZ23 570 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 BHMT2Q9H2M3 363 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 ADAMTS10Q9H324 1103 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 CDHR5Q9HBB8 845 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 GPRC5CQ9NQ84 441 aa10.08□□□□□ -0.8
HMG20A-209ENST00000559728 ZMYND8Q9ULU4 1186 aaPredicted RBP10.08□□□□□ -0.8
HMG20A-209ENST00000559728 PPME1Q9Y570 386 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms