RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 IGFBP4P22692 258 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 TBC1D8BQ0IIM8 1120 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 KIZQ2M2Z5 673 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 TMEM266Q2M3C6 531 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 MTERF2Q49AM1 385 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 XKR3Q5GH77 459 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 EFCAB12Q6NXP0 572 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.3□□□□□ -0.44
SPG11-216ENST00000559347 SLFN12Q8IYM2 578 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 FBXO18Q8NFZ0 1043 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 GDPD5Q8WTR4 605 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 TGS1Q96RS0 853 aaKnown RBP12.3□□□□□ -0.44
SPG11-216ENST00000559347 MAP7D2Q96T17 732 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 YME1L1Q96TA2 773 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 OSMRQ99650 979 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 NIFKQ9BYG3 293 aaKnown RBP12.3□□□□□ -0.44
SPG11-216ENST00000559347 TMX1Q9H3N1 280 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 ERVK-5Q9HDB9 667 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 NRBP2Q9NSY0 501 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 WRAP73Q9P2S5 460 aaPredicted RBP12.3□□□□□ -0.44
SPG11-216ENST00000559347 AKT3Q9Y243 479 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 GINS2Q9Y248 185 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 NOC2LQ9Y3T9 749 aaKnown RBP12.3□□□□□ -0.44
SPG11-216ENST00000559347 ADGRA3Q8IWK6 1321 aa12.3□□□□□ -0.44
SPG11-216ENST00000559347 ENPP3O14638 875 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 LPXNO60711 386 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 GPR32O75388 356 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 RPS6KA5O75582 802 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 TMOD1P28289 359 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 QARSP47897 775 aaKnown RBP12.29□□□□□ -0.44
SPG11-216ENST00000559347 ERVK-21P61565 698 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 PSMC5P62195 406 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 SAFBQ15424 915 aaKnown RBP eCLIP12.29□□□□□ -0.44
SPG11-216ENST00000559347 CALCRLQ16602 461 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 PLA2G4FQ68DD2 849 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 NCAPH2Q6IBW4 605 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 ANO5Q75V66 913 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 FAM228AQ86W67 206 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 FAM184AQ8NB25 1140 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 SH2D3AQ9BRG2 576 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 LXNQ9BS40 222 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 C17orf80Q9BSJ5 609 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 TSPYL2Q9H2G4 693 aaPredicted RBP12.29□□□□□ -0.44
SPG11-216ENST00000559347 MTUS1Q9ULD2 1270 aa12.29□□□□□ -0.44
SPG11-216ENST00000559347 IGKV6-21A0A0C4DH24 114 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 MARCH6O60337 910 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 MGEA5O60502 916 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 BAG4O95429 457 aaKnown RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 P4HBP07237 508 aaKnown RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 POU3F3P20264 500 aaPredicted RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 CRYBB1P53674 252 aaPredicted RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 NLRP11P59045 1033 aaKnown RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 GRB10Q13322 594 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 DRP2Q13474 957 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 EPHA7Q15375 998 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 RTN4RL1Q86UN2 441 aaPredicted RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 CRIPAKQ8N1N5 446 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 ADAMTS10Q9H324 1103 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 FOXP1Q9H334 677 aaPredicted RBP12.28□□□□□ -0.44
SPG11-216ENST00000559347 MTCH2Q9Y6C9 303 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 MUC3AQ02505 3323 aa12.28□□□□□ -0.44
SPG11-216ENST00000559347 DKC1O60832 514 aaKnown RBP eCLIP12.27□□□□□ -0.45
SPG11-216ENST00000559347 MAFO75444 373 aaPredicted RBP12.27□□□□□ -0.45
SPG11-216ENST00000559347 LINC00271P0C7V0 271 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 GPC3P51654 580 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 CYP4A11Q02928 519 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 NFX1Q12986 1120 aaKnown RBP12.27□□□□□ -0.45
SPG11-216ENST00000559347 ORC2Q13416 577 aaPredicted RBP12.27□□□□□ -0.45
SPG11-216ENST00000559347 ODR4Q5SWX8 454 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 FAM43BQ6ZT52 329 aaPredicted RBP12.27□□□□□ -0.45
SPG11-216ENST00000559347 NPAS4Q8IUM7 802 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 NOSTRINQ8IVI9 506 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 C4orf19Q8IY42 314 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 FBXO22Q8NEZ5 403 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 PPM1EQ8WY54 764 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 ZNF689Q96CS4 500 aaPredicted RBP12.27□□□□□ -0.45
SPG11-216ENST00000559347 DYDC2Q96IM9 177 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 TMX3Q96JJ7 454 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 SAMD11Q96NU1 681 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 MTMR9Q96QG7 549 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 TMEM60Q9H2L4 133 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 TTC12Q9H892 705 aaPredicted RBP12.27□□□□□ -0.45
SPG11-216ENST00000559347 SUGCTQ9HAC7 445 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 CYP26B1Q9NR63 512 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 RGL1Q9NZL6 768 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 PCDHA12Q9UN75 941 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 ST3GAL5Q9UNP4 418 aa12.27□□□□□ -0.45
SPG11-216ENST00000559347 CUL9Q8IWT3 2517 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 POTEMA6NI47 508 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 DDX11L8A8MPP1 907 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 GPR182O15218 404 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 GTPBP6O43824 516 aaPredicted RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 DGKIO75912 1065 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 YWHABP31946 246 aaKnown RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 MCM7P33993 719 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 NPEPPSP55786 919 aa12.26□□□□□ -0.45
SPG11-216ENST00000559347 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
SPG11-216ENST00000559347 EPC2Q52LR7 807 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms