RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 SYN1P17600 705 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 CMA1P23946 247 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 THPOP40225 353 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 NDUFA8P51970 172 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 CACNB1Q02641 598 aaPredicted RBP13.84□□□□□ -0.19
GABPB1-208ENST00000558970 FAAP100Q0VG06 881 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 DRP2Q13474 957 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 EMC2Q15006 297 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 HYIQ5T013 277 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 EFCAB12Q6NXP0 572 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 PADI6Q6TGC4 694 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 SLC7A3Q8WY07 619 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 LARP4BQ92615 738 aaKnown RBP13.84□□□□□ -0.19
GABPB1-208ENST00000558970 RAD54LQ92698 747 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 TMEM143Q96AN5 459 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 CTAGE1Q96RT6 745 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 HTATIP2Q9BUP3 242 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 RUSC1Q9BVN2 902 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 ANKEF1Q9NU02 776 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 BLOC1S4Q9NUP1 217 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 TMEM39AQ9NV64 488 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 DBR1Q9UK59 544 aaKnown RBP13.84□□□□□ -0.19
GABPB1-208ENST00000558970 KCNH3Q9ULD8 1083 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 UMODL1Q5DID0 1318 aa13.84□□□□□ -0.19
GABPB1-208ENST00000558970 EVI5O60447 810 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 CD4P01730 458 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 VTNP04004 478 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 KRT18P05783 430 aaKnown RBP13.83□□□□□ -0.2
GABPB1-208ENST00000558970 MUTP22033 750 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 HOXC8P31273 242 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 ADAM17P78536 824 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 TARBP2Q15633 366 aaKnown RBP13.83□□□□□ -0.2
GABPB1-208ENST00000558970 NAALADL2Q58DX5 795 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 CCDC73Q6ZRK6 1079 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 ANKRD33Q7Z3H0 272 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 GPBP1Q86WP2 473 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 GRAMD1CQ8IYS0 662 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 DHX38Q92620 1227 aaKnown RBP13.83□□□□□ -0.2
GABPB1-208ENST00000558970 CEP89Q96ST8 783 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 MTRQ99707 1265 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 ATP6V0A4Q9HBG4 840 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 GPRC5CQ9NQ84 441 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 PDLIM7Q9NR12 457 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 SERTAD1Q9UHV2 236 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 ZMYND8Q9ULU4 1186 aaPredicted RBP13.83□□□□□ -0.2
GABPB1-208ENST00000558970 AKT3Q9Y243 479 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 GINS2Q9Y248 185 aa13.83□□□□□ -0.2
GABPB1-208ENST00000558970 A0A1W2PQ27 194 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 A0A1W2PQ64 194 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 A0A1W2PQD8 194 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 MBLAC1A4D2B0 266 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-208ENST00000558970 MAFO75444 373 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-208ENST00000558970 CYP2C18P33260 490 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 SYKP43405 635 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 AFMP43652 599 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 C1orf53Q5VUE5 145 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 DYMQ7RTS9 669 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 SERINC5Q86VE9 423 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 RETREG2Q8NC44 543 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 SCLT1Q96NL6 688 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 XPNPEP1Q9NQW7 623 aa13.82□□□□□ -0.2
GABPB1-208ENST00000558970 MAGEB2O15479 319 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 DGAT1O75907 488 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 XRCC6P12956 609 aaKnown RBP eCLIP13.81□□□□□ -0.2
GABPB1-208ENST00000558970 LIG1P18858 919 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 CASP1P29466 404 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 RFC5P40937 340 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 CCL23P55773 120 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 PTK7Q13308 1070 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 E2F4Q16254 413 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 RINT1Q6NUQ1 792 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 SV2BQ7L1I2 683 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 RHPN2Q8IUC4 686 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 KSR1Q8IVT5 923 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 SYT2Q8N9I0 419 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-208ENST00000558970 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 TMEM87AQ8NBN3 555 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 SCLYQ96I15 445 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 TOX2Q96NM4 488 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 MAP7D2Q96T17 732 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 SEZ6LQ9BYH1 1024 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 POLR3FQ9H1D9 316 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-208ENST00000558970 HIPK3Q9H422 1215 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 ZHX3Q9H4I2 956 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 DHX33Q9H6R0 707 aaKnown RBP13.81□□□□□ -0.2
GABPB1-208ENST00000558970 STK17AQ9UEE5 414 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 PRKAG2Q9UGJ0 569 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 HPSEQ9Y251 543 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 PCDHA2Q9Y5H9 948 aa13.81□□□□□ -0.2
GABPB1-208ENST00000558970 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 SFI1A8K8P3 1242 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 RSPH10B2B2RC85 870 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 GOLGA6L22H0YM25 854 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 SLC26A4O43511 780 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 HIP1RO75146 1068 aa13.8□□□□□ -0.2
GABPB1-208ENST00000558970 RSPH10BP0C881 870 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms