RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 ALPK3Q96L96 1907 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 A0A087X0B3 334 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 A0A1W2PQ45 241 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-211ENST00000558890 A0A1W2PQY0 241 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 MOXD2PA6NHM9 499 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 USP27XA6NNY8 438 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 WNT7AO00755 349 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 ARHGAP6O43182 974 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 CTIFO43310 598 aaKnown RBP8.51□□□□□ -1.05
LRRC28-211ENST00000558890 PPFIA4O75335 1185 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 ARP10275 920 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 RPA1P27694 616 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 UBA7P41226 1012 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 PURAQ00577 322 aaKnown RBP8.51□□□□□ -1.05
LRRC28-211ENST00000558890 PAK1Q13153 545 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 ITGB3BPQ13352 177 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-211ENST00000558890 STIM1Q13586 685 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 EPHA7Q15375 998 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 E2F4Q16254 413 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 FSCN1Q16658 493 aaKnown RBP8.51□□□□□ -1.05
LRRC28-211ENST00000558890 HSDL1Q3SXM5 330 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 GNASQ5JWF2 1037 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 RRAGBQ5VZM2 374 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 PDXDC2PQ6P474 469 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 RNF180Q86T96 592 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 PPFIBP1Q86W92 1011 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 POLR3CQ9BUI4 534 aaPredicted RBP8.51□□□□□ -1.05
LRRC28-211ENST00000558890 TMEM60Q9H2L4 133 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 CUEDC2Q9H467 287 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 SPC25Q9HBM1 224 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 CTNND2Q9UQB3 1225 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 ARID2Q68CP9 1835 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 SCN10AQ9Y5Y9 1956 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 DOCK5Q9H7D0 1870 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 IGSF9BQ9UPX0 1349 aa8.51□□□□□ -1.05
LRRC28-211ENST00000558890 SZT2Q5T011 3432 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 A0A1B0GTH6 734 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 HAS3O00219 553 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 ZEB2O60315 1214 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 MARCH6O60337 910 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 LGR5O75473 907 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 CABYRO75952 493 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 CD4P01730 458 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 RPN1P04843 607 aaKnown RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 RPLP2P05387 115 aaKnown RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 P4HBP07237 508 aaKnown RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PSAPP07602 524 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 C6orf222P0C671 652 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PPP1R2P41236 205 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 STX17P56962 302 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 CUL4BQ13620 913 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 TRIM14Q14142 442 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 ZNF658Q5TYW1 1059 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 E4F1Q66K89 784 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 MIS18BP1Q6P0N0 1132 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 CXCL17Q6UXB2 119 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 FAM43BQ6ZT52 329 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PLPPR4Q7Z2D5 763 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 DHX37Q8IY37 1157 aaKnown RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 C4orf19Q8IY42 314 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 EXOC8Q8IYI6 725 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PCSK9Q8NBP7 692 aaKnown RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 AFG1LQ8WV93 481 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 SEPT1Q8WYJ6 367 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 ATP6V0A1Q93050 837 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 FAM167AQ96KS9 214 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 TOX2Q96NM4 488 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 BAG1Q99933 345 aaPredicted RBP8.5□□□□□ -1.05
LRRC28-211ENST00000558890 C16orf70Q9BSU1 422 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 KATNAL1Q9BW62 490 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 BLZF1Q9H2G9 400 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PRO3102Q9H379 93 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 MLXIPQ9HAP2 919 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 DISC1Q9NRI5 854 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 KCND2Q9NZV8 630 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PCDH10Q9P2E7 1040 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 STK17AQ9UEE5 414 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 LRWD1Q9UFC0 647 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 RWDD2AQ9UIY3 292 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PCDHA10Q9Y5I2 948 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 PHLPP2Q6ZVD8 1323 aa8.5□□□□□ -1.05
LRRC28-211ENST00000558890 GSTTP1A0A1W2PQM5 241 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 TRIM43BA6NCK2 446 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 PPP1R3GB7ZBB8 358 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 KBTBD13C9JR72 458 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 AKR1B15C9JRZ8 316 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ARVCFO00192 962 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 STX10O60499 249 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 GGPS1O95749 300 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 MMP3P08254 477 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ITGB8P26012 769 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 HOXC8P31273 242 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 TXKP42681 527 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 ATN1P54259 1190 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 RTP1P59025 263 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 TLE2Q04725 743 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 TBX2Q13207 712 aaPredicted RBP8.49□□□□□ -1.05
LRRC28-211ENST00000558890 HIC1Q14526 733 aa8.49□□□□□ -1.05
LRRC28-211ENST00000558890 KCNB1Q14721 858 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms