RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 EIF5BO60841 1220 aaKnown RBP14.08□□□□□ -0.16
SMAD3-208ENST00000558827 GPR32O75388 356 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 STBD1O95210 358 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 CTNNB1P35222 781 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 TBC1D8BQ0IIM8 1120 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 GPM6BQ13491 265 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 TRIM29Q14134 588 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 BTG3Q14201 252 aaPredicted RBP14.08□□□□□ -0.16
SMAD3-208ENST00000558827 MOXD1Q6UVY6 613 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 B3GNT9Q6UX72 402 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 FAM228AQ86W67 206 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 ZNF579Q8NAF0 562 aaKnown RBP14.08□□□□□ -0.16
SMAD3-208ENST00000558827 HAS1Q92839 578 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 TNFRSF25Q93038 417 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 SCLT1Q96NL6 688 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 ADAM2Q99965 735 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 BRMS1Q9HCU9 246 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 RGL1Q9NZL6 768 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 VAV3Q9UKW4 847 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 LRFN2Q9ULH4 789 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 CEP131Q9UPN4 1083 aa14.08□□□□□ -0.16
SMAD3-208ENST00000558827 DENND3A2RUS2 1198 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 ZBTB39O15060 712 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 MAGEB2O15479 319 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 MMP1P03956 469 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 CRYBB1P53674 252 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-208ENST00000558827 NPEPPSP55786 919 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 CYP4A11Q02928 519 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 CTTNQ14247 550 aaKnown RBP14.07□□□□□ -0.16
SMAD3-208ENST00000558827 FAM177A1Q8N128 213 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-208ENST00000558827 DYDC2Q96IM9 177 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 MAP7D2Q96T17 732 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 KCNMB3Q9NPA1 279 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 WRAP73Q9P2S5 460 aaPredicted RBP14.07□□□□□ -0.16
SMAD3-208ENST00000558827 KDM3AQ9Y4C1 1321 aa14.07□□□□□ -0.16
SMAD3-208ENST00000558827 RPLP2P05387 115 aaKnown RBP14.06□□□□□ -0.16
SMAD3-208ENST00000558827 POU3F3P20264 500 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-208ENST00000558827 TMOD1P28289 359 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 KCNQ1P51787 676 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 TARBP2Q15633 366 aaKnown RBP14.06□□□□□ -0.16
SMAD3-208ENST00000558827 XKR3Q5GH77 459 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 FAM102BQ5T8I3 360 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 PPP4R3AQ6IN85 833 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 EP400NLQ6ZTU2 488 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 KSR1Q8IVT5 923 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 LINC01465Q8N7H1 131 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 RNF169Q8NCN4 708 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 NLRP7Q8WX94 980 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 FAM20AQ96MK3 541 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 NECAB3Q96P71 396 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-208ENST00000558827 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
SMAD3-208ENST00000558827 ADAMTS10Q9H324 1103 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 HCSTQ9UBK5 93 aa14.06□□□□□ -0.16
SMAD3-208ENST00000558827 MRPL42Q9Y6G3 142 aaKnown RBP14.06□□□□□ -0.16
SMAD3-208ENST00000558827 GPR182O15218 404 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 GRM6O15303 877 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 DGKIO75912 1065 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 BAG4O95429 457 aaKnown RBP14.05□□□□□ -0.16
SMAD3-208ENST00000558827 GCFC2P16383 781 aaKnown RBP14.05□□□□□ -0.16
SMAD3-208ENST00000558827 TXKP42681 527 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 QARSP47897 775 aaKnown RBP14.05□□□□□ -0.16
SMAD3-208ENST00000558827 GPC3P51654 580 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 PSMC5P62195 406 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 MRPS5P82675 430 aaKnown RBP14.05□□□□□ -0.16
SMAD3-208ENST00000558827 TJAP1Q5JTD0 557 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 ANO5Q75V66 913 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 NPAS4Q8IUM7 802 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 RDM1Q8NG50 284 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 C8orf76Q96K31 380 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 ASB2Q96Q27 587 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 FTHL17Q9BXU8 183 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 NIFKQ9BYG3 293 aaKnown RBP14.05□□□□□ -0.16
SMAD3-208ENST00000558827 SUCLA2Q9P2R7 463 aaPredicted RBP14.05□□□□□ -0.16
SMAD3-208ENST00000558827 PCDHB7Q9Y5E2 793 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 SQORQ9Y6N5 450 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 ADGRA3Q8IWK6 1321 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 NLRC5Q86WI3 1866 aa14.05□□□□□ -0.16
SMAD3-208ENST00000558827 A0A087WZ62 844 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 TBKBP1A7MCY6 615 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 STAG3L1P0CL83 205 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 FGFR1P11362 822 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 MCM7P33993 719 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 BMPR1AP36894 532 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 PPP2R5CQ13362 524 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 EPHA7Q15375 998 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 ZNF174Q15697 407 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 CALCRLQ16602 461 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 SPOUT1Q5T280 376 aaKnown RBP14.04□□□□□ -0.16
SMAD3-208ENST00000558827 RHPN2Q8IUC4 686 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 TPH2Q8IWU9 490 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 TMEM143Q96AN5 459 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 ZNF689Q96CS4 500 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-208ENST00000558827 CEP89Q96ST8 783 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 FDXACB1Q9BRP7 624 aaPredicted RBP14.04□□□□□ -0.16
SMAD3-208ENST00000558827 TMEM60Q9H2L4 133 aa14.04□□□□□ -0.16
SMAD3-208ENST00000558827 RC3H2Q9HBD1 1191 aaKnown RBP14.04□□□□□ -0.16
SMAD3-208ENST00000558827 ALG13Q9NP73 1137 aaKnown RBP14.04□□□□□ -0.16
SMAD3-208ENST00000558827 H3BNC9 293 aa14.03□□□□□ -0.16
SMAD3-208ENST00000558827 P4HBP07237 508 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms