RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NPAS4Q8IUM7 802 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 CKAP2LQ8IYA6 745 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 SMAP1Q8IYB5 467 aaPredicted RBP13.04□□□□□ -0.32
CASC4-205ENST00000558735 CCDC148Q8NFR7 591 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 GJA10Q969M2 543 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 MSLNLQ96KJ4 702 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 PHOX2BQ99453 314 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 ERVK-5Q9HDB9 667 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 CD207Q9UJ71 328 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 ST3GAL5Q9UNP4 418 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 GINS2Q9Y248 185 aa13.04□□□□□ -0.32
CASC4-205ENST00000558735 LOC730098B7Z3J9 87 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 M0R2N6 131 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 ZNF862O60290 1169 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 TBX10O75333 385 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 GPR32O75388 356 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 RPS6KA5O75582 802 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 MMP1P03956 469 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 VTNP04004 478 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 GATMP50440 423 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 CRYBB1P53674 252 aaPredicted RBP13.03□□□□□ -0.32
CASC4-205ENST00000558735 NPY5RQ15761 445 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 NAALADL2Q58DX5 795 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 CMTR2Q8IYT2 770 aaKnown RBP13.03□□□□□ -0.32
CASC4-205ENST00000558735 METTL13Q8N6R0 699 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 TBCKQ8TEA7 893 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 SLC5A5Q92911 643 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 P2RX5Q93086 422 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 RIT2Q99578 217 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 ADAM2Q99965 735 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 ALG13Q9NP73 1137 aaKnown RBP13.03□□□□□ -0.32
CASC4-205ENST00000558735 DISC1Q9NRI5 854 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 PLAGL2Q9UPG8 496 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 SAMM50Q9Y512 469 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 MRPL42Q9Y6G3 142 aaKnown RBP13.03□□□□□ -0.32
CASC4-205ENST00000558735 NLRC5Q86WI3 1866 aa13.03□□□□□ -0.32
CASC4-205ENST00000558735 ZFHX2Q9C0A1 2572 aaPredicted RBP13.02□□□□□ -0.32
CASC4-205ENST00000558735 CYP3A7-CYP3A51PA0A087WV96 503 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 TMEM221A6NGB7 291 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 M0R296 226 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 PSMD10O75832 226 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 DEXIO95424 95 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 STAG3L1P0CL83 205 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 CYP3A7P24462 503 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
CASC4-205ENST00000558735 FAM189BP81408 668 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 COASYQ13057 564 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 STK3Q13188 491 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 KIZQ2M2Z5 673 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 PAN2Q504Q3 1202 aaKnown RBP13.02□□□□□ -0.33
CASC4-205ENST00000558735 IER5LQ5T953 404 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 EFCAB12Q6NXP0 572 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 FAM43BQ6ZT52 329 aaPredicted RBP13.02□□□□□ -0.33
CASC4-205ENST00000558735 TRIM22Q8IYM9 498 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 BLIDQ8IZY5 108 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 LINC01465Q8N7H1 131 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 SMRP1Q8NCR6 262 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 SPPL3Q8TCT6 385 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 AIFM3Q96NN9 605 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 PPP1R16BQ96T49 567 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 UNC45AQ9H3U1 944 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 RGS18Q9NS28 235 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 NRBP2Q9NSY0 501 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 PDRG1Q9NUG6 133 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 PCDHB7Q9Y5E2 793 aa13.02□□□□□ -0.33
CASC4-205ENST00000558735 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 EVPLQ92817 2033 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 CACNA1HO95180 2353 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 WDR64B1ANS9 1081 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 C9IYK1 514 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 CPLX1O14810 134 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 GPR182O15218 404 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 MAGEB2O15479 319 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 ITGB1P05556 798 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 DNAJB1P25685 340 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 CLCN3P51790 818 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 ZXDAP98168 799 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 TCF15Q12870 199 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 DSC3Q14574 896 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 CLUL1Q15846 466 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 UGCGQ16739 394 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 Q4G0T1 1027 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 FAM102BQ5T8I3 360 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 SLC24A5Q71RS6 500 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 FAM228AQ86W67 206 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 EFHBQ8N7U6 833 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 PBXIP1Q96AQ6 731 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 OSMRQ99650 979 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 ADAMTS10Q9H324 1103 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 CEP131Q9UPN4 1083 aa13.01□□□□□ -0.33
CASC4-205ENST00000558735 LOXHD1Q8IVV2 1947 aa13□□□□□ -0.33
CASC4-205ENST00000558735 LINC01565O15544 149 aa13□□□□□ -0.33
CASC4-205ENST00000558735 GAS7O60861 476 aa13□□□□□ -0.33
CASC4-205ENST00000558735 DTNBO60941 627 aa13□□□□□ -0.33
CASC4-205ENST00000558735 STBD1O95210 358 aa13□□□□□ -0.33
CASC4-205ENST00000558735 TDP2O95551 362 aa13□□□□□ -0.33
CASC4-205ENST00000558735 GTF2F1P35269 517 aaKnown RBP eCLIP13□□□□□ -0.33
CASC4-205ENST00000558735 NLRP11P59045 1033 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms