RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 PPP2R5CQ13362 524 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 KIZQ2M2Z5 673 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 EPC2Q52LR7 807 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 XKR3Q5GH77 459 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 ZNF689Q96CS4 500 aaPredicted RBP17.44■□□□□ 0.38
CSHL1-208ENST00000558609 KIF2CQ99661 725 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 TMX1Q9H3N1 280 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 VAV3Q9UKW4 847 aa17.44■□□□□ 0.38
CSHL1-208ENST00000558609 COL4A4P53420 1690 aaPredicted RBP17.44■□□□□ 0.38
CSHL1-208ENST00000558609 REV3LO60673 3130 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 BDP1A6H8Y1 2624 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 GPR182O15218 404 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 MMP1P03956 469 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 VTNP04004 478 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 CLCN3P51790 818 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 PSMC5P62195 406 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 NFX1Q12986 1120 aaKnown RBP17.43■□□□□ 0.38
CSHL1-208ENST00000558609 NPAS4Q8IUM7 802 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 TMEM192Q8IY95 271 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 FIBCD1Q8N539 461 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 HAS1Q92839 578 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 CEP89Q96ST8 783 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 MAP7D2Q96T17 732 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 ADAMTS10Q9H324 1103 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 ST3GAL5Q9UNP4 418 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 ADGRA3Q8IWK6 1321 aa17.43■□□□□ 0.38
CSHL1-208ENST00000558609 FAM205CA6NFA0 338 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 H3BNC9 293 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 EML1O00423 815 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 LINC00271P0C7V0 271 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 STAG3L1P0CL83 205 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 BMP1P13497 986 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 TBC1D8BQ0IIM8 1120 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 TRIM29Q14134 588 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 LRRC71Q8N4P6 559 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 CLP1Q92989 425 aaKnown RBP17.42■□□□□ 0.38
CSHL1-208ENST00000558609 OSMRQ99650 979 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 LLPHQ9BRT6 129 aaKnown RBP17.42■□□□□ 0.38
CSHL1-208ENST00000558609 AKT3Q9Y243 479 aa17.42■□□□□ 0.38
CSHL1-208ENST00000558609 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 PLA2G5P39877 138 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 SARSP49591 514 aaKnown RBP17.41■□□□□ 0.38
CSHL1-208ENST00000558609 NLRP11P59045 1033 aaKnown RBP17.41■□□□□ 0.38
CSHL1-208ENST00000558609 TFF2Q03403 129 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 SKIV2LQ15477 1246 aaKnown RBP17.41■□□□□ 0.38
CSHL1-208ENST00000558609 FAM228AQ86W67 206 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 DIS3L2Q8IYB7 885 aaKnown RBP17.41■□□□□ 0.38
CSHL1-208ENST00000558609 BANK1Q8NDB2 785 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 ZSCAN31Q96LW9 406 aaPredicted RBP17.41■□□□□ 0.38
CSHL1-208ENST00000558609 PPP1R16BQ96T49 567 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 RGS18Q9NS28 235 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 SEPT9Q9UHD8 586 aaPredicted RBP17.41■□□□□ 0.38
CSHL1-208ENST00000558609 COG5Q9UP83 839 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 RWDD3Q9Y3V2 267 aa17.41■□□□□ 0.38
CSHL1-208ENST00000558609 IGKV6-21A0A0C4DH24 114 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 DDX11L8A8MPP1 907 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 C5orf67F2Z3F1 127 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 MARCH6O60337 910 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 MGEA5O60502 916 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 DKC1O60832 514 aaKnown RBP eCLIP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 BAG4O95429 457 aaKnown RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 RB1P06400 928 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 P4HBP07237 508 aaKnown RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 BMPR1AP36894 532 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 QARSP47897 775 aaKnown RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 RBM25P49756 843 aaKnown RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 CDC42EP1Q00587 391 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 GPM6BQ13491 265 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 BTG3Q14201 252 aaPredicted RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 EPHA7Q15375 998 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 MTERF2Q49AM1 385 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 SLC24A5Q71RS6 500 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 ANO5Q75V66 913 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 CCDC83Q8IWF9 413 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 SLFN12Q8IYM2 578 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 CMTR2Q8IYT2 770 aaKnown RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 MRPL38Q96DV4 380 aaKnown RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 ADAM2Q99965 735 aa17.4■□□□□ 0.38
CSHL1-208ENST00000558609 RNF216Q9NWF9 866 aaPredicted RBP17.4■□□□□ 0.38
CSHL1-208ENST00000558609 RALGAPA2Q2PPJ7 1873 aa17.39■□□□□ 0.38
CSHL1-208ENST00000558609 NLRC5Q86WI3 1866 aa17.39■□□□□ 0.38
CSHL1-208ENST00000558609 TMEM150BA6NC51 233 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 C9IYK1 514 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 EIF4BP23588 611 aaKnown RBP17.39■□□□□ 0.37
CSHL1-208ENST00000558609 GPC3P51654 580 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 FAM189BP81408 668 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 SPIRE1Q08AE8 756 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 DSC3Q14574 896 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 PTPROQ16827 1216 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 SH2B1Q9NRF2 756 aaPredicted RBP17.39■□□□□ 0.37
CSHL1-208ENST00000558609 LRFN2Q9ULH4 789 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 PCDHB7Q9Y5E2 793 aa17.39■□□□□ 0.37
CSHL1-208ENST00000558609 DENND3A2RUS2 1198 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 MAFO75444 373 aaPredicted RBP17.38■□□□□ 0.37
CSHL1-208ENST00000558609 DARSP14868 501 aaKnown RBP17.38■□□□□ 0.37
CSHL1-208ENST00000558609 CTNNB1P35222 781 aa17.38■□□□□ 0.37
CSHL1-208ENST00000558609 DNM2P50570 870 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms