RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 PLCG1P19174 1290 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 CLCN3P51790 818 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 EFCAB12Q6NXP0 572 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 SHC4Q6S5L8 630 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 RETREG2Q8NC44 543 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 WNT8AQ9H1J5 351 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 BHMT2Q9H2M3 363 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 PPME1Q9Y570 386 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 ARHGEF35A5YM69 484 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 PITPNM1O00562 1244 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
TPM1-214ENST00000558544 EYA4O95677 639 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 RFC5P40937 340 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 CCL23P55773 120 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 RBL2Q08999 1139 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 TMEM62Q0P6H9 643 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 EMC2Q15006 297 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 ZNF618Q5T7W0 954 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 LINC01465Q8N7H1 131 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 LRRC15Q8TF66 581 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 SLC7A3Q8WY07 619 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 DHX33Q9H6R0 707 aaKnown RBP19.44■□□□□ 0.7
TPM1-214ENST00000558544 CCDC39Q9UFE4 941 aa19.44■□□□□ 0.7
TPM1-214ENST00000558544 TET1Q8NFU7 2136 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 IGKV6-21A0A0C4DH24 114 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 TMOD1P28289 359 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 DRP2Q13474 957 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 TPRNQ4KMQ1 711 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 LRRC8DQ7L1W4 858 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 RSPH3Q86UC2 560 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 KIAA0319LQ8IZA0 1049 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 BADQ92934 168 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 SCLYQ96I15 445 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 MTRQ99707 1265 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 JPH2Q9BR39 696 aaPredicted RBP19.43■□□□□ 0.7
TPM1-214ENST00000558544 ATP6V0A4Q9HBG4 840 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 AKT3Q9Y243 479 aa19.43■□□□□ 0.7
TPM1-214ENST00000558544 A0A087X0B3 334 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 H0YGN5 161 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 DGAT1O75907 488 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 VTNP04004 478 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 SELPP16109 830 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 MRPS6P82932 125 aaKnown RBP19.42■□□□□ 0.7
TPM1-214ENST00000558544 MDM2Q00987 491 aaPredicted RBP19.42■□□□□ 0.7
TPM1-214ENST00000558544 MKRN4PQ13434 485 aaPredicted RBP19.42■□□□□ 0.7
TPM1-214ENST00000558544 RESP18Q5W5W9 173 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 MFSD5Q6N075 450 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 PADI6Q6TGC4 694 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 RPAINQ86UA6 219 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 KCTD17Q8N5Z5 321 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 MAP7D2Q96T17 732 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 PPP1R16BQ96T49 567 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 PANK2Q9BZ23 570 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 XPNPEP1Q9NQW7 623 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 BLOC1S4Q9NUP1 217 aa19.42■□□□□ 0.7
TPM1-214ENST00000558544 RBAK-RBAKDNI3L0D1 243 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 CAND2O75155 1236 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 RPLP2P05387 115 aaKnown RBP19.41■□□□□ 0.7
TPM1-214ENST00000558544 SSBP05455 408 aaKnown RBP eCLIP19.41■□□□□ 0.7
TPM1-214ENST00000558544 IQCF3P0C7M6 154 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 PLA2G4BP0C869 781 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 RRAGBQ5VZM2 374 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 ADALQ6DHV7 355 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 TRAF7Q6Q0C0 670 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 EXOC8Q8IYI6 725 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 PDILTQ8N807 584 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 RAD54LQ92698 747 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 TMEM143Q96AN5 459 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 CDY2AQ9Y6F7 541 aa19.41■□□□□ 0.7
TPM1-214ENST00000558544 RSPH10B2B2RC85 870 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 RSPH10BP0C881 870 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 DNM2P50570 870 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 MGAT3Q09327 533 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 DHX8Q14562 1220 aaKnown RBP19.4■□□□□ 0.7
TPM1-214ENST00000558544 MAEAQ7L5Y9 396 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 NME8Q8N427 588 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 TMEM199Q8N511 208 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 LARP4BQ92615 738 aaKnown RBP19.4■□□□□ 0.7
TPM1-214ENST00000558544 LBHD1Q9BQE6 289 aaPredicted RBP19.4■□□□□ 0.7
TPM1-214ENST00000558544 FAM13BQ9NYF5 915 aa19.4■□□□□ 0.7
TPM1-214ENST00000558544 SUCLA2Q9P2R7 463 aaPredicted RBP19.4■□□□□ 0.7
TPM1-214ENST00000558544 M0QZ92 97 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 GAS2O43903 313 aaKnown RBP19.39■□□□□ 0.69
TPM1-214ENST00000558544 CHRNA1P02708 482 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 CSF2RAP15509 400 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 STAT6P42226 847 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 SLC12A3P55017 1021 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 MCM6Q14566 821 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 MBTPS1Q14703 1052 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 NAALADL2Q58DX5 795 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 FAM26DQ5JW98 314 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 IER5Q5VY09 327 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 CCDC73Q6ZRK6 1079 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 SYT2Q8N9I0 419 aaPredicted RBP19.39■□□□□ 0.69
TPM1-214ENST00000558544 TCP11Q8WWU5 503 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 ZNF668Q96K58 619 aaPredicted RBP19.39■□□□□ 0.69
TPM1-214ENST00000558544 RUSC1Q9BVN2 902 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 STK17AQ9UEE5 414 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 GINS2Q9Y248 185 aa19.39■□□□□ 0.69
TPM1-214ENST00000558544 TRPV2Q9Y5S1 764 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms