RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 KRI1Q8N9T8 703 aaKnown RBP7.78□□□□□ -1.16
LRRC28-207ENST00000558500 RUBCNQ92622 972 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 GLG1Q92896 1179 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 PIGSQ96S52 555 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 SMARCAD1Q9H4L7 1026 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 ERVK-5Q9HDB9 667 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 CYP26B1Q9NR63 512 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 RGS18Q9NS28 235 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 C1orf112Q9NSG2 853 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 MAD2L2Q9UI95 211 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 ATRXP46100 2492 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 DMXL1Q9Y485 3027 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 SALL3Q9BXA9 1300 aa7.78□□□□□ -1.16
LRRC28-207ENST00000558500 SMIM35A0A1B0GVV1 85 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 DENND3A2RUS2 1198 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 C9IYK1 514 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 DPYSL4O14531 572 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 ZNF213O14771 459 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 ATP9AO75110 1047 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 CLASP2O75122 1294 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 EOMESO95936 686 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 FGFR1P11362 822 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 KCNA2P16389 499 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 PPM1AP35813 382 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 KRT76Q01546 638 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 KRT17Q04695 432 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 NFX1Q12986 1120 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 NMIQ13287 307 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 SMC1AQ14683 1233 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 RSPO4Q2I0M5 234 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 ATAT1Q5SQI0 421 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 RARS2Q5T160 578 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 PCNX4Q63HM2 1172 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 KCNT2Q6UVM3 1135 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 TICAM2Q86XR7 235 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 SIX5Q8N196 739 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 NME8Q8N427 588 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 C12orf76Q8N812 135 aaPredicted RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 MRPL43Q8N983 215 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 ADAM2Q99965 735 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 HINFPQ9BQA5 517 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 DZANK1Q9NVP4 752 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 TMEM161AQ9NX61 479 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 DBR1Q9UK59 544 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 FBXL21Q9UKT6 434 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 DUSP12Q9UNI6 340 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 NOC2LQ9Y3T9 749 aaKnown RBP7.77□□□□□ -1.17
LRRC28-207ENST00000558500 PCDHA2Q9Y5H9 948 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 USP24Q9UPU5 2620 aa7.77□□□□□ -1.17
LRRC28-207ENST00000558500 PNMA6FA0A0J9YX94 578 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 PALM3A6NDB9 673 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-207ENST00000558500 C2orf71A6NGG8 1288 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 B4E1Z4 1266 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 GPR37O15354 613 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 RPS6KA5O75582 802 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 PBX3P40426 434 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 EMP3P54852 163 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 FAM189BP81408 668 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 TDGQ13569 410 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 IFIT1BQ5T764 474 aaKnown RBP7.76□□□□□ -1.17
LRRC28-207ENST00000558500 C20orf194Q5TEA3 1177 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 KANK3Q6NY19 840 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 ZC3H14Q6PJT7 736 aaKnown RBP7.76□□□□□ -1.17
LRRC28-207ENST00000558500 LRRC55Q6ZSA7 311 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 DCLK2Q8N568 766 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 TRAPPC12Q8WVT3 735 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 RIN2Q8WYP3 895 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-207ENST00000558500 ACSF2Q96CM8 615 aaPredicted RBP7.76□□□□□ -1.17
LRRC28-207ENST00000558500 GPRASP2Q96D09 838 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 CDHR1Q96JP9 859 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 ZNF558Q96NG5 402 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 CASD1Q96PB1 797 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 PCYT2Q99447 389 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 TMEM117Q9H0C3 514 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 KDM4CQ9H3R0 1056 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 RIOX1Q9H6W3 641 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 ELAC1Q9H777 363 aaKnown RBP7.76□□□□□ -1.17
LRRC28-207ENST00000558500 KCNK12Q9HB15 430 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 SPG21Q9NZD8 308 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 ZSWIM5Q9P217 1185 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 ST3GAL5Q9UNP4 418 aa7.76□□□□□ -1.17
LRRC28-207ENST00000558500 BAHCC1Q9P281 2608 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 GPR182O15218 404 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 HOXA2O43364 376 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 EPCAMP16422 314 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 PLCB4Q15147 1175 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 ST3GAL2Q16842 350 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 ODR4Q5SWX8 454 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 USP17L6PQ6QN14 398 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 MTHFD1LQ6UB35 978 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 OTOP3Q7RTS5 596 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 SLC39A11Q8N1S5 342 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 LRRC43Q8N309 656 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 SMARCC2Q8TAQ2 1214 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 TMEM40Q8WWA1 233 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 TNPO1Q92973 898 aaKnown RBP7.75□□□□□ -1.17
LRRC28-207ENST00000558500 MARVELD3Q96A59 401 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 UBAC1Q9BSL1 405 aa7.75□□□□□ -1.17
LRRC28-207ENST00000558500 AZI2Q9H6S1 392 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms