RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 POLGP54098 1239 aaPredicted RBP16.49■□□□□ 0.23
VPS18-202ENST00000558474 NPEPPSP55786 919 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 COASYQ13057 564 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 STIM1Q13586 685 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 MTERF2Q49AM1 385 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 RNF180Q86T96 592 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 TRIM50Q86XT4 487 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 MTG1Q9BT17 334 aaPredicted RBP16.49■□□□□ 0.23
VPS18-202ENST00000558474 RNPEPQ9H4A4 650 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 TRPC6Q9Y210 931 aa16.49■□□□□ 0.23
VPS18-202ENST00000558474 IGKV6-21A0A0C4DH24 114 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 BIN1O00499 593 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 USO1O60763 962 aaKnown RBP16.48■□□□□ 0.23
VPS18-202ENST00000558474 HIP1RO75146 1068 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 CABYRO75952 493 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 ZNF286BP0CG31 522 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 PTGS1P23219 599 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 MARK3P27448 753 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 PURAQ00577 322 aaKnown RBP16.48■□□□□ 0.23
VPS18-202ENST00000558474 TBC1D8BQ0IIM8 1120 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 SLC9C1Q4G0N8 1177 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 HERC4Q5GLZ8 1057 aaPredicted RBP16.48■□□□□ 0.23
VPS18-202ENST00000558474 GNASQ5JWF2 1037 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 FBXO46Q6PJ61 603 aaPredicted RBP16.48■□□□□ 0.23
VPS18-202ENST00000558474 TCP11Q8WWU5 503 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 KAT2BQ92831 832 aa16.48■□□□□ 0.23
VPS18-202ENST00000558474 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
VPS18-202ENST00000558474 TSEN34Q9BSV6 310 aaKnown RBP16.48■□□□□ 0.23
VPS18-202ENST00000558474 NRCAMQ92823 1304 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 NPHP3-ACAD11A0A0J9YXS1 232 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 TMEM150BA6NC51 233 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 ZBTB42B2RXF5 422 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 H0YCG3 227 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 MYL3P08590 195 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 HSPA1AP0DMV8 641 aaKnown RBP16.47■□□□□ 0.23
VPS18-202ENST00000558474 HSPA1BP0DMV9 641 aaKnown RBP16.47■□□□□ 0.23
VPS18-202ENST00000558474 PLS3P13797 630 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 CAPN2P17655 700 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 BMP6P22004 513 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 ERCC5P28715 1186 aaPredicted RBP16.47■□□□□ 0.23
VPS18-202ENST00000558474 PSEN2P49810 448 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 MAPK7Q13164 816 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 ALCAMQ13740 583 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 MFSD10Q14728 455 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 EMC2Q15006 297 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 DPCR1Q3MIW9 517 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 ANO6Q4KMQ2 910 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 FAM26FQ5R3K3 315 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 IER5Q5VY09 327 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 LHX8Q68G74 356 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 CCSAPQ6IQ19 270 aaPredicted RBP16.47■□□□□ 0.23
VPS18-202ENST00000558474 FOXR2Q6PJQ5 311 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 STXBP4Q6ZWJ1 553 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 RETREG2Q8NC44 543 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 ARRDC4Q8NCT1 418 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 KCNN1Q92952 543 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 NTPCRQ9BSD7 190 aaKnown RBP16.47■□□□□ 0.23
VPS18-202ENST00000558474 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.47■□□□□ 0.23
VPS18-202ENST00000558474 ST6GALNAC4Q9H4F1 302 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 PCDHA2Q9Y5H9 948 aa16.47■□□□□ 0.23
VPS18-202ENST00000558474 KAT6AQ92794 2004 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 MOXD2PA6NHM9 499 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 GNAT1P11488 350 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 INSRRP14616 1297 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 BEX3Q00994 111 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 RAD51AP2Q09MP3 1159 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 PPP2R5AQ15172 486 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 DAW1Q8N136 415 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 GUF1Q8N442 669 aaKnown RBP16.46■□□□□ 0.23
VPS18-202ENST00000558474 MYCT1Q8N699 235 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 FAM200AQ8TCP9 573 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 SPIRE2Q8WWL2 714 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 DHTKD1Q96HY7 919 aaPredicted RBP16.46■□□□□ 0.23
VPS18-202ENST00000558474 SEZ6LQ9BYH1 1024 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 PAK6Q9NQU5 681 aaPredicted RBP16.46■□□□□ 0.23
VPS18-202ENST00000558474 XPNPEP1Q9NQW7 623 aa16.46■□□□□ 0.23
VPS18-202ENST00000558474 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.22
VPS18-202ENST00000558474 UBE4BO95155 1302 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 EIF3DO15371 548 aaKnown RBP eCLIP16.45■□□□□ 0.22
VPS18-202ENST00000558474 ASAP2O43150 1006 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 PGK1P00558 417 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 ARL2P36404 184 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 ZNF165P49910 485 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 DNM2P50570 870 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 LBX1P52954 281 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 SMTNP53814 917 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 STK4Q13043 487 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 PPFIA1Q13136 1202 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 MXD4Q14582 209 aaPredicted RBP16.45■□□□□ 0.22
VPS18-202ENST00000558474 ODR4Q5SWX8 454 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 FAM102BQ5T8I3 360 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 ISM2Q6H9L7 571 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 TRMT1LQ7Z2T5 733 aaKnown RBP16.45■□□□□ 0.22
VPS18-202ENST00000558474 SFR1Q86XK3 245 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 FAM178BQ8IXR5 827 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 ADSSL1Q8N142 457 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 ZNF710Q8N1W2 664 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 SH3TC2Q8TF17 1288 aa16.45■□□□□ 0.22
VPS18-202ENST00000558474 IFT74Q96LB3 600 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms