RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ICA1Q05084 483 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 NELFCDQ8IXH7 590 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 METTL13Q8N6R0 699 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 VGLL2Q8N8G2 317 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 IFT74Q96LB3 600 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 TSC22D3Q99576 134 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ZMYND12Q9H0C1 365 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 NUCKS1Q9H1E3 243 aaKnown RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CUEDC2Q9H467 287 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 MLXIPLQ9NP71 852 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 FAM114A2Q9NRY5 505 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ZBTB12Q9Y330 459 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 MYH2Q9UKX2 1941 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 PKD1L3Q7Z443 1732 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 KLHL33A6NCF5 533 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CCDC169A6NNP5 214 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 USP17L12C9JPN9 530 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 USP17L21D6R901 530 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ASAP2O43150 1006 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 AOC2O75106 756 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 MYCP01106 439 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 OR52Z1P0C646 297 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 KRT13P13646 458 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 COPB2P35606 906 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 IFI35P80217 286 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 KCNMA1Q12791 1236 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 RIPK1Q13546 671 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ANKRD20A2Q5SQ80 823 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ANKRD20A1Q5TYW2 823 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ANKRD20A3Q5VUR7 823 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SUSD4Q5VX71 490 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CDCA2Q69YH5 1023 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 CENPPQ6IPU0 288 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 SLC30A9Q6PML9 568 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ADGRA1Q86SQ6 560 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 NEK9Q8TD19 979 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 L3MBTL3Q96JM7 780 aaPredicted RBP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 C7orf25Q9BPX7 421 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 ZHX3Q9H4I2 956 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 MAGEF1Q9HAY2 307 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 IRAK4Q9NWZ3 460 aa5.5□□□□□ -1.53
HMG20A-204ENST00000558288 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.5□□□□□ -1.53
HMG20A-204ENST00000558288 AKAP11Q9UKA4 1901 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SCN11AQ9UI33 1791 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 CCDC188H7C350 402 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 HIP1RO75146 1068 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 FGGP02679 453 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 KRT16P08779 473 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 MYBP10242 640 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 USP11P51784 963 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PMS2P54278 862 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 INHBEP58166 350 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 NCALDP61601 193 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 CIAPIN1Q6FI81 312 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 OTUD6AQ7L8S5 288 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SLC51AQ86UW1 340 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ANKRD42Q8N9B4 389 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 FBF1Q8TES7 1133 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SCFD2Q8WU76 684 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 RAB17Q9H0T7 212 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 HOMER3Q9NSC5 361 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 FGFR1OP2Q9NVK5 253 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ZFATQ9P243 1243 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 HDAC9Q9UKV0 1011 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 CORO1CQ9ULV4 474 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PCDHA6Q9UN73 950 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 TRIM33Q9UPN9 1127 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PCDHA8Q9Y5H6 950 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 LY75O60449 1722 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 MYH7BA7E2Y1 1941 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 MYMKA6NI61 221 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 RBAK-RBAKDNI3L0D1 243 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SUN1O94901 812 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PECAM1P16284 738 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 MSH2P43246 934 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SSR1P43307 286 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 GMPSP49915 693 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 EVX2Q03828 476 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF268Q14587 947 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 NBPF20Q3BBV1 942 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 NUGGCQ68CJ6 796 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 CLEC4GQ6UXB4 293 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 CCDC25Q86WR0 208 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 EIF1ADQ8N9N8 165 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 GLIS3Q8NEA6 775 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ACTRT1Q8TDG2 376 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ZNF317Q96PQ6 595 aaPredicted RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PLA2G12BQ9BX93 195 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 ZC3H12CQ9C0D7 883 aaKnown RBP5.49□□□□□ -1.53
HMG20A-204ENST00000558288 KCNK9Q9NPC2 374 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SLC5A4Q9NY91 659 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 TMEM59LQ9UK28 342 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 SNX24Q9Y343 169 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 COL4A3BPQ9Y5P4 624 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 TJP1Q07157 1748 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 MROH5Q6ZUA9 1318 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 PDE4DIPQ5VU43 2346 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 LRRD1A4D1F6 860 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 TCP11X1B4DZS4 312 aa5.49□□□□□ -1.53
HMG20A-204ENST00000558288 MARCH6O60337 910 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms