RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 TRIM71Q2Q1W2 868 aaKnown RBP8.63□□□□□ -1.03
SPG11-205ENST00000558080 ZNF618Q5T7W0 954 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 BLOC1S2Q6QNY1 142 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 METTL7BQ6UX53 244 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 TRIM50Q86XT4 487 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.63□□□□□ -1.03
SPG11-205ENST00000558080 PPM1EQ8WY54 764 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 KCNB2Q92953 911 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 BRF1Q92994 677 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 ATP6V0A1Q93050 837 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 GAS2L1Q99501 681 aaPredicted RBP8.63□□□□□ -1.03
SPG11-205ENST00000558080 USP26Q9BXU7 913 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 RNPEPQ9H4A4 650 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 POLMQ9NP87 494 aaPredicted RBP8.63□□□□□ -1.03
SPG11-205ENST00000558080 PCDHA11Q9Y5I1 949 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 PRUNE2Q8WUY3 3088 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 CDH23Q9H251 3354 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 CHD7Q9P2D1 2997 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 BDP1A6H8Y1 2624 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 SMCO2A6NFE2 343 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 STXBP3O00186 592 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 TREHO43280 583 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 KCNA2P16389 499 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 ITGB5P18084 799 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 IGFBP4P22692 258 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 THPOP40225 353 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 KCNJ6P48051 423 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 METAP2P50579 478 aaKnown RBP eCLIP8.62□□□□□ -1.03
SPG11-205ENST00000558080 ADCY7P51828 1080 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 RBL2Q08999 1139 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 TMCO2Q7Z6W1 182 aaPredicted RBP8.62□□□□□ -1.03
SPG11-205ENST00000558080 SERINC5Q86VE9 423 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 GIMAP8Q8ND71 665 aaPredicted RBP8.62□□□□□ -1.03
SPG11-205ENST00000558080 GPRASP2Q96D09 838 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 SLC9A7Q96T83 725 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 SENP7Q9BQF6 1050 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 EHMT1Q9H9B1 1298 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 RIC8AQ9NPQ8 531 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 SETD4Q9NVD3 440 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 TMEM260Q9NX78 707 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 UBIAD1Q9Y5Z9 338 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 UNC80Q8N2C7 3258 aa8.62□□□□□ -1.03
SPG11-205ENST00000558080 TTC3P53804 2025 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 ATG2AQ2TAZ0 1938 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 GSTTP1A0A1W2PQM5 241 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 RSPH10B2B2RC85 870 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 RFXAPO00287 272 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 REC8O95072 547 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 CXCL10P02778 98 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 ADH1AP07327 375 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 CA3P07451 260 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 RSPH10BP0C881 870 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 RPS6KB1P23443 525 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 TCF7P36402 384 aaPredicted RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 WDR5P61964 334 aaKnown RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 ARHGAP4P98171 946 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 MTMR1Q13613 665 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 ADGRE1Q14246 886 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 MBTPS1Q14703 1052 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 CCDC85BQ15834 202 aaPredicted RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 JAKMIP3Q5VZ66 844 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 CNKSR3Q6P9H4 555 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 HERC6Q8IVU3 1022 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 USP38Q8NB14 1042 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 CYP2W1Q8TAV3 490 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 SEPT1Q8WYJ6 367 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 CDHR1Q96JP9 859 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 IPO9Q96P70 1041 aaKnown RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 MXRA8Q9BRK3 442 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 ANO3Q9BYT9 981 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 ZNF395Q9H8N7 513 aaPredicted RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 CERS4Q9HA82 394 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 JADE2Q9NQC1 790 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 BARHL2Q9NY43 387 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 ZNF215Q9UL58 517 aaPredicted RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
SPG11-205ENST00000558080 RALGAPA2Q2PPJ7 1873 aa8.61□□□□□ -1.03
SPG11-205ENST00000558080 EYSQ5T1H1 3165 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 KIAA1671Q9BY89 1806 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 CCDC196A0A1B0GTZ2 297 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 KIF28PB7ZC32 967 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 hCG_1984214I3L0E3 225 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 ADAMTS3O15072 1205 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 LILRA1O75019 489 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 LGR5O75473 907 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 BAIAP3O94812 1187 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 PARNO95453 639 aaKnown RBP8.6□□□□□ -1.03
SPG11-205ENST00000558080 FOSP01100 380 aaPredicted RBP8.6□□□□□ -1.03
SPG11-205ENST00000558080 CTSHP09668 335 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 ARP10275 920 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 GNAT1P11488 350 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 SCG2P13521 617 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 MARK3P27448 753 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 PSMA5P28066 241 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 HOXC8P31273 242 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 ZNF76P36508 570 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 CCT2P78371 535 aaKnown RBP8.6□□□□□ -1.03
SPG11-205ENST00000558080 DEFB103AP81534 67 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 IKBKEQ14164 716 aa8.6□□□□□ -1.03
SPG11-205ENST00000558080 PFKFB3Q16875 520 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms