RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ADSSL1Q8N142 457 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 ZNF296Q8WUU4 475 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 TSG101Q99816 390 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 C2orf40Q9H1Z8 148 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 HMX1Q9NP08 348 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-213ENST00000557765 PDLIM7Q9NR12 457 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 TBC1D7Q9P0N9 293 aa11.63□□□□□ -0.55
GABRB3-213ENST00000557765 PDXKO00764 312 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 ZNF862O60290 1169 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 STBD1O95210 358 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 IDEP14735 1019 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 CCNE1P24864 410 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 GRK4P32298 578 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 NAMPTP43490 491 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 POU5F1Q01860 360 aaKnown RBP11.62□□□□□ -0.55
GABRB3-213ENST00000557765 COASYQ13057 564 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 PAK1Q13153 545 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 TFDP1Q14186 410 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 FSCN1Q16658 493 aaKnown RBP11.62□□□□□ -0.55
GABRB3-213ENST00000557765 ARSHQ5FYA8 562 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 SPATA1Q5VX52 437 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 CENPPQ6IPU0 288 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 SESTD1Q86VW0 696 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 FAM178BQ8IXR5 827 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 NME8Q8N427 588 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 ARRDC4Q8NCT1 418 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 PIGOQ8TEQ8 1089 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 TRIB2Q92519 343 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 REEP2Q9BRK0 252 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 R3HDMLQ9H3Y0 253 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 PKD2L1Q9P0L9 805 aa11.62□□□□□ -0.55
GABRB3-213ENST00000557765 SEPT9Q9UHD8 586 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-213ENST00000557765 CAND2O75155 1236 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 TPM2P07951 284 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 CYP2C19P33261 490 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 PSMC6P62333 389 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 DPCR1Q3MIW9 517 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 ODR4Q5SWX8 454 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 TAF2Q6P1X5 1199 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 SARM1Q6SZW1 724 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 HS2ST1Q7LGA3 356 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 USP37Q86T82 979 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 ZNF507Q8TCN5 953 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 CD99L2Q8TCZ2 262 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 AFG1LQ8WV93 481 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 PSPC1Q8WXF1 523 aaKnown RBP11.61□□□□□ -0.55
GABRB3-213ENST00000557765 GJA10Q969M2 543 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 IQCDQ96DY2 449 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 CEP63Q96MT8 703 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 C16orf70Q9BSU1 422 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 THAP9Q9H5L6 903 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 TMEM134Q9H6X4 195 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 GRPEL1Q9HAV7 217 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 PDGFCQ9NRA1 345 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 FLRT1Q9NZU1 646 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 TRAF3IP3Q9Y228 551 aa11.61□□□□□ -0.55
GABRB3-213ENST00000557765 MYH9P35579 1960 aaKnown RBP11.61□□□□□ -0.55
GABRB3-213ENST00000557765 HAS3O00219 553 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 MAPK13O15264 365 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 DYNC1LI2O43237 492 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 CBFA2T2O43439 604 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 CALUO43852 315 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 PRKAR2AP13861 404 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 EEF1GP26641 437 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 CTGFP29279 349 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 NCKAP1LP55160 1127 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 GTF2BQ00403 316 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 FKBP3Q00688 224 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 CACNB2Q08289 660 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 EMC2Q15006 297 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 PLCB4Q15147 1175 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 KNOP1Q1ED39 458 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 NFRKBQ6P4R8 1299 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 EPM2AIP1Q7L775 607 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 DYMQ7RTS9 669 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 ZNF720Q7Z2F6 126 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 APBB1IPQ7Z5R6 666 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 RPAINQ86UA6 219 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 ZNF410Q86VK4 478 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 C12orf56Q8IXR9 622 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 MYCT1Q8N699 235 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 DNAJC5GQ8N7S2 189 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 PRIMPOLQ96LW4 560 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 PCYT2Q99447 389 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 PLIN2Q99541 437 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 MTG1Q9BT17 334 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 MKNK1Q9BUB5 465 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 INO80BQ9C086 356 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 BLZF1Q9H2G9 400 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 MRPL44Q9H9J2 332 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 KIAA1586Q9HCI6 787 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 TYW1Q9NV66 732 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 DDX20Q9UHI6 824 aaKnown RBP11.6□□□□□ -0.55
GABRB3-213ENST00000557765 TRPC6Q9Y210 931 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 PCDHA2Q9Y5H9 948 aa11.6□□□□□ -0.55
GABRB3-213ENST00000557765 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms