RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 STBD1O95210 358 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 LYPLA2O95372 231 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 COL9A1P20849 921 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 PSRC1Q6PGN9 363 aaPredicted RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 PIGOQ8TEQ8 1089 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 LEO1Q8WVC0 666 aaPredicted RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 ATXN2LQ8WWM7 1075 aaKnown RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 CEP170P1Q96L14 293 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 MMTAG2Q9BU76 263 aaKnown RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 NIFKQ9BYG3 293 aaKnown RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 SCAND2PQ9GZW5 306 aaPredicted RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 RCOR1Q9UKL0 485 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 KDM3AQ9Y4C1 1321 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 COL1A2P08123 1366 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 ZBTB42B2RXF5 422 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 KLRC1P26715 233 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 TXLNAP40222 546 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 NPEPPSP55786 919 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 ECM1Q16610 540 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 XKR9Q5GH70 373 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 MARCH8Q5T0T0 291 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 HERVK_113Q902F9 699 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 CALML4Q96GE6 196 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 EPSTI1Q96J88 318 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 ASB2Q96Q27 587 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 NACC1Q96RE7 527 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 IL23AQ9NPF7 189 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
RCCD1-209ENST00000557750 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
RCCD1-209ENST00000557750 NCOR1O75376 2440 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 MBLAC1A4D2B0 266 aaPredicted RBP13.65□□□□□ -0.22
RCCD1-209ENST00000557750 CUTAO60888 179 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 MUTP22033 750 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 ADAM17P78536 824 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 TBC1D8BQ0IIM8 1120 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 PTK7Q13308 1070 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
RCCD1-209ENST00000557750 MTHFD1LQ6UB35 978 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 SERINC5Q86VE9 423 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 METTL13Q8N6R0 699 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 CTAGE1Q96RT6 745 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 PLIN2Q99541 437 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 NT5C3AQ9H0P0 336 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 GDPD2Q9HCC8 539 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 THEGQ9P2T0 379 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 MSRAQ9UJ68 235 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 PCDHA7Q9UN72 937 aa13.65□□□□□ -0.22
RCCD1-209ENST00000557750 C22orf31O95567 290 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 IGFBP4P22692 258 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 KARSQ15046 597 aaKnown RBP13.64□□□□□ -0.23
RCCD1-209ENST00000557750 TARBP2Q15633 366 aaKnown RBP13.64□□□□□ -0.23
RCCD1-209ENST00000557750 RAB30Q15771 203 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 TAF2Q6P1X5 1199 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 RUFY4Q6ZNE9 571 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 USP49Q70CQ1 688 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 ZNF579Q8NAF0 562 aaKnown RBP13.64□□□□□ -0.23
RCCD1-209ENST00000557750 RETREG2Q8NC44 543 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 FAM49AQ9H0Q0 323 aaPredicted RBP13.64□□□□□ -0.23
RCCD1-209ENST00000557750 NKX2-4Q9H2Z4 354 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 HIPK3Q9H422 1215 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 BMP2KQ9NSY1 1161 aaPredicted RBP13.64□□□□□ -0.23
RCCD1-209ENST00000557750 ANKEF1Q9NU02 776 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 RAPGEFL1Q9UHV5 662 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 DNM3Q9UQ16 869 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
RCCD1-209ENST00000557750 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
RCCD1-209ENST00000557750 MAGEB2O15479 319 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 FGBP02675 491 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 XRCC6P12956 609 aaKnown RBP eCLIP13.63□□□□□ -0.23
RCCD1-209ENST00000557750 RARRES1P49788 294 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 POLGP54098 1239 aaPredicted RBP13.63□□□□□ -0.23
RCCD1-209ENST00000557750 BFSP2Q13515 415 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 CCDC155Q8N6L0 562 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 CAGE1Q8TC20 777 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 ADAMTS19Q8TE59 1207 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 SLC7A3Q8WY07 619 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 DHX38Q92620 1227 aaKnown RBP13.63□□□□□ -0.23
RCCD1-209ENST00000557750 WNT8BQ93098 351 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 PNMA5Q96PV4 448 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 CCSER1Q9C0I3 900 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 SUGCTQ9HAC7 445 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 CCDC39Q9UFE4 941 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 PCDHA2Q9Y5H9 948 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 REV3LO60673 3130 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 ARHGEF35A5YM69 484 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 E9PMD0 336 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 SLC26A4O43511 780 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 TMOD1P28289 359 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 THPOP40225 353 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 CCL23P55773 120 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 MRPS5P82675 430 aaKnown RBP13.63□□□□□ -0.23
RCCD1-209ENST00000557750 GRB10Q13322 594 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 HYIQ5T013 277 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 AXDND1Q5T1B0 1012 aaPredicted RBP13.63□□□□□ -0.23
RCCD1-209ENST00000557750 EFCAB12Q6NXP0 572 aa13.63□□□□□ -0.23
RCCD1-209ENST00000557750 OTOP2Q7RTS6 562 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms