RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	INPP4A	Q96PE3	977 aa	Predicted RBP	10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	SENP7	Q9BQF6	1050 aa		10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	FOXQ1	Q9C009	403 aa		10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	ELAC1	Q9H777	363 aa	Known RBP	10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	RTEL1	Q9NZ71	1219 aa		10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	RAB23	Q9ULC3	237 aa		10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	ZMIZ1	Q9ULJ6	1067 aa		10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	TELO2	Q9Y4R8	837 aa		10.87	□□□□□ -0.67
PABPN1-208	ENST00000557702	GCOM1	H8Y6P7	765 aa	Predicted RBP	10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	GPR182	O15218	404 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	LRRN2	O75325	713 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	RPS6KA5	O75582	802 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	POLR2M	P0CAP2	368 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	INSRR	P14616	1297 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	STARD6	P59095	220 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	FAM189B	P81408	668 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	SPEM2	Q0P670	501 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	SEMA3F	Q13275	785 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	ZMYM1	Q5SVZ6	1142 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	C15orf39	Q6ZRI6	1047 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	SIRT2	Q8IXJ6	389 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	ABI1	Q8IZP0	508 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	VPS52	Q8N1B4	723 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	SLC39A11	Q8N1S5	342 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	LRRC43	Q8N309	656 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	GIMAP8	Q8ND71	665 aa	Predicted RBP	10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	STAM	Q92783	540 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	TNPO1	Q92973	898 aa	Known RBP	10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	CASD1	Q96PB1	797 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	LRRCC1	Q9C099	1032 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	SMARCAD1	Q9H4L7	1026 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	JMJD4	Q9H9V9	463 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	EPS15L1	Q9UBC2	864 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	PCDHA2	Q9Y5H9	948 aa		10.86	□□□□□ -0.67
PABPN1-208	ENST00000557702	FOXP2	O15409	715 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	N4BP1	O75113	896 aa	Known RBP	10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	ALDH7A1	P49419	539 aa	Known RBP	10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	MRPS9	P82933	396 aa	Known RBP	10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	ASPRV1	Q53RT3	343 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	DGKH	Q86XP1	1220 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	SEPT1	Q8WYJ6	367 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	TMEM169	Q96HH4	297 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	SLC2A4RG	Q9NR83	387 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	ST3GAL5	Q9UNP4	418 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	GINS2	Q9Y248	185 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	IRAK3	Q9Y616	596 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	DENND4A	Q7Z401	1863 aa		10.85	□□□□□ -0.67
PABPN1-208	ENST00000557702	FLNB	O75369	2602 aa	Known RBP	10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	SMIM35	A0A1B0GVV1	85 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	KANSL1L	A0AUZ9	987 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	TRIM6-TRIM34	B2RNG4	842 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	SMARCA5	O60264	1052 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	LRP3	O75074	770 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	MAGEA9	P43362	315 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	METAP2	P50579	478 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	POLG	P54098	1239 aa	Predicted RBP	10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	IL31	Q6EBC2	164 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	LRSAM1	Q6UWE0	723 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	PNMA1	Q8ND90	353 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	AUTS2	Q8WXX7	1259 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	NELL1	Q92832	810 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	ZBP1	Q9H171	429 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	NOC2L	Q9Y3T9	749 aa	Known RBP	10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	LOXHD1	Q8IVV2	1947 aa		10.84	□□□□□ -0.67
PABPN1-208	ENST00000557702	FRY	Q5TBA9	3013 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	GSTTP1	A0A1W2PQM5	241 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	NT5C1B-RDH14	C9J2C7	533 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	RET	P07949	1114 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	PARP1	P09874	1014 aa	Known RBP	10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	CTSA	P10619	480 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	ALX1	Q15699	326 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	TSHZ3	Q63HK5	1081 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	LAIR1	Q6GTX8	287 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	PRR23C	Q6ZRP0	262 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	NLRX1	Q86UT6	975 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	FAM126A	Q9BYI3	521 aa	Predicted RBP	10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	OSBPL6	Q9BZF3	934 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	KAT14	Q9H8E8	782 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	WDR6	Q9NNW5	1121 aa	Known RBP	10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	MYH6	P13533	1939 aa		10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	SETX	Q7Z333	2677 aa	Known RBP	10.83	□□□□□ -0.68
PABPN1-208	ENST00000557702	FAM170B	A6NMN3	283 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	C1QTNF9B	B2RNN3	333 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	ZBTB5	O15062	677 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	FOXD2	O60548	495 aa	Predicted RBP	10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	C1QTNF9	P0C862	333 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	PC	P11498	1178 aa	Known RBP	10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	KLRC2	P26717	231 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	BCAR1	P56945	870 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	TRAF1	Q13077	416 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	SNW1	Q13573	536 aa	Known RBP	10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	UBXN2B	Q14CS0	331 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	LPAL2	Q16609	132 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	CCDC178	Q5BJE1	867 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	VPS53	Q5VIR6	699 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	UNQ6494/PRO21346	Q6UXR6	183 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	CYP26C1	Q6V0L0	522 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	MFSD6	Q6ZSS7	791 aa		10.82	□□□□□ -0.68
PABPN1-208	ENST00000557702	CELF5	Q8N6W0	485 aa	Known RBP	10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms