RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 CEP170P1Q96L14 293 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 TRIM47Q96LD4 638 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 RUSC1Q9BVN2 902 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 C17orf75Q9HAS0 396 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 PARVGQ9HBI0 331 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 CYP26B1Q9NR63 512 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 FAM184BQ9ULE4 1060 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 GDAQ9Y2T3 454 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 LRRC37A2A6NM11 1700 aa11.35□□□□□ -0.59
GABRB3-212ENST00000557641 ZBTB39O15060 712 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 ZNF865P0CJ78 1059 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-212ENST00000557641 HOXD8P13378 290 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-212ENST00000557641 SMPD1P17405 629 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 CCNE1P24864 410 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 ABCD1P33897 745 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 PRMT2P55345 433 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 RTP1P59025 263 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 ALCAMQ13740 583 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 NCAPHQ15003 741 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 CCDC144BQ3MJ40 725 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 BRDTQ58F21 947 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-212ENST00000557641 SARM1Q6SZW1 724 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 MYOCDQ8IZQ8 938 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 NELFBQ8WX92 580 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 KIFAP3Q92845 792 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 GLG1Q92896 1179 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 ERO1AQ96HE7 468 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 PCYT2Q99447 389 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 JPH2Q9BR39 696 aaPredicted RBP11.34□□□□□ -0.59
GABRB3-212ENST00000557641 ZHX3Q9H4I2 956 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 SLC39A2Q9NP94 309 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 FLRT1Q9NZU1 646 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 PCDHA2Q9Y5H9 948 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 SYNRGQ9UMZ2 1314 aa11.34□□□□□ -0.59
GABRB3-212ENST00000557641 NPHP3-ACAD11A0A0J9YXS1 232 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 GPR25O00155 361 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 EIF3DO15371 548 aaKnown RBP eCLIP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 GAS2O43903 313 aaKnown RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 HBP1O60381 514 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 SORBS3O60504 671 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 USO1O60763 962 aaKnown RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 HIP1RO75146 1068 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 FGFR1OPO95684 399 aaKnown RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 ATP4AP20648 1035 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 CTGFP29279 349 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 FLT3LGP49771 235 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 MAP2K1Q02750 393 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 SPAG1Q07617 926 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 TPD52L1Q16890 204 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 UTP14CQ5TAP6 766 aaKnown RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 CENPPQ6IPU0 288 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 KLHL10Q6JEL2 608 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 SFR1Q86XK3 245 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 SMYD4Q8IYR2 804 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 MYCT1Q8N699 235 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 KIAA0895Q8NCT3 520 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 OR6J1Q8NGC5 347 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 ATP8B4Q8TF62 1192 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 COPS5Q92905 334 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 P2RX5Q93086 422 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 TSG101Q99816 390 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 ATP6V0A4Q9HBG4 840 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 PDLIM7Q9NR12 457 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 ERAP1Q9NZ08 941 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 SRRDQ9UH36 339 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 ZNF215Q9UL58 517 aaPredicted RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 CTNND2Q9UQB3 1225 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 GNEQ9Y223 722 aaKnown RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 NFE2L3Q9Y4A8 694 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 ZNFX1Q9P2E3 1918 aaKnown RBP11.33□□□□□ -0.6
GABRB3-212ENST00000557641 UBE4BO95155 1302 aa11.33□□□□□ -0.6
GABRB3-212ENST00000557641 A6NJR5 290 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 H0YCG3 227 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 FKTNO75072 461 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 PLS3P13797 630 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 AKR1A1P14550 325 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 CYP2C19P33261 490 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 DEKP35659 375 aaKnown RBP11.32□□□□□ -0.6
GABRB3-212ENST00000557641 SMTNP53814 917 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 NPEPPSP55786 919 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 RAD51AP2Q09MP3 1159 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 MAPK7Q13164 816 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 TARBP2Q15633 366 aaKnown RBP11.32□□□□□ -0.6
GABRB3-212ENST00000557641 CCL14Q16627 93 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 DGKDQ16760 1214 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 BMT2Q1RMZ1 405 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 ODR4Q5SWX8 454 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 ZNF507Q8TCN5 953 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 PTCD2Q8WV60 388 aaKnown RBP11.32□□□□□ -0.6
GABRB3-212ENST00000557641 AFG1LQ8WV93 481 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 SLC7A3Q8WY07 619 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 ARHGAP39Q9C0H5 1083 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 AP5M1Q9H0R1 490 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 ST6GALNAC4Q9H4F1 302 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 DHX33Q9H6R0 707 aaKnown RBP11.32□□□□□ -0.6
GABRB3-212ENST00000557641 MRPL44Q9H9J2 332 aaKnown RBP11.32□□□□□ -0.6
GABRB3-212ENST00000557641 FANCLQ9NW38 375 aa11.32□□□□□ -0.6
GABRB3-212ENST00000557641 TELO2Q9Y4R8 837 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms