RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TPH2Q8IWU9 490 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 C4orf19Q8IY42 314 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 MYLIPQ8WY64 445 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 GUCD1Q96NT3 240 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 TSHZ2Q9NRE2 1034 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 LRFN2Q9ULH4 789 aa15.46■□□□□ 0.07
VPS33B-206ENST00000557358 LOXHD1Q8IVV2 1947 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 DENND3A2RUS2 1198 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 VTNP04004 478 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 MYOGP15173 224 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 U2AF2P26368 475 aaKnown RBP eCLIP15.45■□□□□ 0.06
VPS33B-206ENST00000557358 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
VPS33B-206ENST00000557358 RFC5P40937 340 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 NLRP11P59045 1033 aaKnown RBP15.45■□□□□ 0.06
VPS33B-206ENST00000557358 KIZQ2M2Z5 673 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 LARP1BQ659C4 914 aaKnown RBP15.45■□□□□ 0.06
VPS33B-206ENST00000557358 HAUS3Q68CZ6 603 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 LRRC71Q8N4P6 559 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 TCP11Q8WWU5 503 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 NLRP7Q8WX94 980 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 TOP1MTQ969P6 601 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 DYDC2Q96IM9 177 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 OSMRQ99650 979 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 GCOM2Q9BZD3 368 aaPredicted RBP15.45■□□□□ 0.06
VPS33B-206ENST00000557358 INO80BQ9C086 356 aaPredicted RBP15.45■□□□□ 0.06
VPS33B-206ENST00000557358 PRDM12Q9H4Q4 367 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 CYP26B1Q9NR63 512 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 PADI3Q9ULW8 664 aa15.45■□□□□ 0.06
VPS33B-206ENST00000557358 LAD1O00515 517 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 ZSCAN20P17040 1043 aaPredicted RBP15.44■□□□□ 0.06
VPS33B-206ENST00000557358 IGFBP4P22692 258 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 CYP4A11Q02928 519 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 TARBP2Q15633 366 aaKnown RBP15.44■□□□□ 0.06
VPS33B-206ENST00000557358 RILPL1Q5EBL4 403 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 XKR9Q5GH70 373 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 SAMD11Q96NU1 681 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 MTMR9Q96QG7 549 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 TGS1Q96RS0 853 aaKnown RBP15.44■□□□□ 0.06
VPS33B-206ENST00000557358 PPP1R16BQ96T49 567 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 EIF2AK1Q9BQI3 630 aaKnown RBP15.44■□□□□ 0.06
VPS33B-206ENST00000557358 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
VPS33B-206ENST00000557358 ENPP3O14638 875 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 MAFO75444 373 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-206ENST00000557358 EIF4BP23588 611 aaKnown RBP15.43■□□□□ 0.06
VPS33B-206ENST00000557358 TECP42680 631 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 CTTNQ14247 550 aaKnown RBP15.43■□□□□ 0.06
VPS33B-206ENST00000557358 TCTN1Q2MV58 587 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 ANO5Q75V66 913 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 MAFAQ8NHW3 353 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-206ENST00000557358 ARNTL2Q8WYA1 636 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 AGO3Q9H9G7 860 aaKnown RBP15.43■□□□□ 0.06
VPS33B-206ENST00000557358 TUFT1Q9NNX1 390 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 RGL1Q9NZL6 768 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 SUCLA2Q9P2R7 463 aaPredicted RBP15.43■□□□□ 0.06
VPS33B-206ENST00000557358 RWDD3Q9Y3V2 267 aa15.43■□□□□ 0.06
VPS33B-206ENST00000557358 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 LYPLA2O95372 231 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 CD2BP2O95400 341 aaKnown RBP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 XRCC6P12956 609 aaKnown RBP eCLIP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 SFPQP23246 707 aaKnown RBP eCLIP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 TAP1Q03518 808 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 SPIRE1Q08AE8 756 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 PLA2G4FQ68DD2 849 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 TMCO2Q7Z6W1 182 aaPredicted RBP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 RHPN2Q8IUC4 686 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 NPAS4Q8IUM7 802 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 PSPC1Q8WXF1 523 aaKnown RBP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 TSPYL2Q9H2G4 693 aaPredicted RBP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 TMEM60Q9H2L4 133 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 ANKEF1Q9NU02 776 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 ST3GAL5Q9UNP4 418 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 NOC2LQ9Y3T9 749 aaKnown RBP15.42■□□□□ 0.06
VPS33B-206ENST00000557358 PCDHB7Q9Y5E2 793 aa15.42■□□□□ 0.06
VPS33B-206ENST00000557358 TTC3P53804 2025 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 ASAP2O43150 1006 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 GPR32O75388 356 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 DGAT1O75907 488 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 SLITRK3O94933 977 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 HSP90AA1P07900 732 aaKnown RBP15.41■□□□□ 0.06
VPS33B-206ENST00000557358 GPC3P51654 580 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 HTRA4P83105 476 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-206ENST00000557358 MKRN4PQ13434 485 aaPredicted RBP15.41■□□□□ 0.06
VPS33B-206ENST00000557358 HSCBQ8IWL3 235 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 FIBCD1Q8N539 461 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 LINC01465Q8N7H1 131 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 NACC1Q96RE7 527 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 MTRQ99707 1265 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 HSD17B14Q9BPX1 270 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 ERVK-5Q9HDB9 667 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 DACT1Q9NYF0 836 aa15.41■□□□□ 0.06
VPS33B-206ENST00000557358 SIP14410 1827 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 IGKV6-21A0A0C4DH24 114 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 TMEM150BA6NC51 233 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 POTEMA6NI47 508 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 STBD1O95210 358 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 BMP15O95972 392 aa15.4■□□□□ 0.06
VPS33B-206ENST00000557358 DARSP14868 501 aaKnown RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 IBSPP21815 317 aaPredicted RBP15.4■□□□□ 0.06
VPS33B-206ENST00000557358 MUTP22033 750 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms