RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
ATXN3-246ENST00000557030 ARHGEF12Q9NZN5 1544 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 UHRF1BP1Q6BDS2 1440 aa6.07□□□□□ -1.44
ATXN3-246ENST00000557030 SYCP2Q9BX26 1530 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 TCRBV16S1A1N1A0A5B0 115 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 GSTA4O15217 222 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 CYP1A1P04798 512 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-246ENST00000557030 CRY1Q16526 586 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 FAM47CQ5HY64 1035 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 PRRT2Q7Z6L0 340 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-246ENST00000557030 NOP9Q86U38 636 aaKnown RBP6.06□□□□□ -1.44
ATXN3-246ENST00000557030 JAZF1Q86VZ6 243 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 STPG3Q8N7X2 389 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 CCDC136Q96JN2 1154 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 CLUHP3Q96NS8 147 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 TMEM260Q9NX78 707 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 PPP4R1LQ9P1A2 415 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 ARHGAP20Q9P2F6 1191 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 FTSJ1Q9UET6 329 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 ATP23Q9Y6H3 246 aa6.06□□□□□ -1.44
ATXN3-246ENST00000557030 ZCCHC11Q5TAX3 1644 aaKnown RBP6.06□□□□□ -1.44
ATXN3-246ENST00000557030 ARHGAP5Q13017 1502 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 PLD2O14939 933 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 AOAHP28039 575 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 EPHB4P54760 987 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 HERVK_113P62684 666 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 SURF1Q15526 300 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 TM4SF20Q53R12 229 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 FSTL4Q6MZW2 842 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 Q6ZUG5 572 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 SLC39A2Q9NP94 309 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 FANCLQ9NW38 375 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 PLCH2O75038 1416 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 UNC13BO14795 1591 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 SPATA31D1Q6ZQQ2 1576 aa6.05□□□□□ -1.44
ATXN3-246ENST00000557030 DHX29Q7Z478 1369 aaKnown RBP6.05□□□□□ -1.44
ATXN3-246ENST00000557030 PLA2R1Q13018 1463 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 RALGAPBQ86X10 1494 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 PLEKHH2Q8IVE3 1493 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 K7ESM1 405 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 NPTXRO95502 500 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 MPIG6BO95866 241 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 GLRBP48167 497 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 STILQ15468 1287 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 CCDC184Q52MB2 194 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 EP400NLQ6ZTU2 488 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 OTOP1Q7RTM1 612 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 HOMER1Q86YM7 354 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 KBTBD2Q8IY47 623 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 TTC9BQ8N6N2 239 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 DLG3Q92796 817 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 SAMD11Q96NU1 681 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 C1QTNF3Q9BXJ4 246 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 RIC8BQ9NVN3 520 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 PLXNC1O60486 1568 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 BCORL1Q5H9F3 1711 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 MYO5CQ9NQX4 1742 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 BRD4O60885 1362 aaPredicted RBP6.04□□□□□ -1.44
ATXN3-246ENST00000557030 USP47Q96K76 1375 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 FAM135AQ9P2D6 1515 aa6.04□□□□□ -1.44
ATXN3-246ENST00000557030 POLR1AO95602 1720 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 KDM5CP41229 1560 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 TCERG1O14776 1098 aaKnown RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 LAMTOR5O43504 91 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 ADRB1P08588 477 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 CSF2RBP32927 897 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 MAGEA10P43363 369 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 MECP2P51608 486 aaKnown RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 PPP2CBP62714 309 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 PPP2CAP67775 309 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 RALBP1Q15311 655 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 FNDC3BQ53EP0 1204 aaKnown RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 PLEKHH3Q7Z736 793 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 REXO1L1PQ8IX06 675 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 TACO1Q9BSH4 297 aaKnown RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 BARX1Q9HBU1 254 aaPredicted RBP6.03□□□□□ -1.44
ATXN3-246ENST00000557030 CD2APQ9Y5K6 639 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 B3GALT1Q9Y5Z6 326 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 INSRP06213 1382 aa6.03□□□□□ -1.44
ATXN3-246ENST00000557030 TRAPPC8Q9Y2L5 1435 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 GPR42O15529 346 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 OPA1O60313 960 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 CNOT4O95628 575 aaKnown RBP6.02□□□□□ -1.45
ATXN3-246ENST00000557030 ZBTB48P10074 688 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-246ENST00000557030 PTGS1P23219 599 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 SDHAP31040 664 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 ADAM17P78536 824 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 PABPC4Q13310 644 aaKnown RBP eCLIP6.02□□□□□ -1.45
ATXN3-246ENST00000557030 TOP3AQ13472 1001 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-246ENST00000557030 ZNF460Q14592 562 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 TKFCQ3LXA3 575 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 IGSF22Q8N9C0 903 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 DNERQ8NFT8 737 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 APPBP2Q92624 585 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 WNK4Q96J92 1243 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 AMNQ9BXJ7 453 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 MEGF9Q9H1U4 602 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 ABCC1P33527 1531 aa6.02□□□□□ -1.45
ATXN3-246ENST00000557030 DUOX2Q9NRD8 1548 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms