RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 AGBL2Q5U5Z8 902 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 DCAF12L1Q5VU92 463 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 AADACL2Q6P093 401 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 HES6Q96HZ4 224 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 BHMT2Q9H2M3 363 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 ERVK-5Q9HDB9 667 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 HAUS2Q9NVX0 235 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 POLLQ9UGP5 575 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 GGA1Q9UJY5 639 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 NENFQ9UMX5 172 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 PITPNM2Q9BZ72 1349 aa12.39□□□□□ -0.43
SRP54-213ENST00000556994 TLDC2A0PJX2 215 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 PDXKO00764 312 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 RIMBP2O15034 1052 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 CALUO43852 315 aaPredicted RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 POU5F1Q01860 360 aaKnown RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 SPIRE1Q08AE8 756 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 ANKRD20A8PQ5CZ79 823 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 EPM2AIP1Q7L775 607 aaPredicted RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 CACNA2D3Q8IZS8 1091 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 SYT2Q8N9I0 419 aaPredicted RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 CNBD1Q8NA66 436 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 RPGRQ92834 1020 aaKnown RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 FAM163AQ96GL9 167 aaPredicted RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 PSMD1Q99460 953 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 FMO2Q99518 471 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 RUSC1Q9BVN2 902 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 SLITRK6Q9H5Y7 841 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 SEPT11Q9NVA2 429 aaKnown RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 SERPINB13Q9UIV8 391 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 GGA2Q9UJY4 613 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 GAKO14976 1311 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 SPDYE3A6NKU9 549 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 FAM196BA6NMK8 535 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 SRRM3A6NNA2 597 aaPredicted RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 SHMT1P34896 483 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 CDR1P51861 262 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 UBAP2Q5T6F2 1119 aaKnown RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 SYCE1Q8N0S2 351 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
SRP54-213ENST00000556994 TAS2R14Q9NYV8 317 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 RGL1Q9NZL6 768 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 BCS1LQ9Y276 419 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 NHSQ6T4R5 1651 aa12.38□□□□□ -0.43
SRP54-213ENST00000556994 PLIN4Q96Q06 1357 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 MEIS2O14770 477 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 OPLAHO14841 1288 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 STAT1P42224 750 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 SCNN1DP51172 638 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 PLTPP55058 493 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 ARHGAP4P98171 946 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 COG2Q14746 738 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 USH1GQ495M9 461 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 ZC2HC1CQ53FD0 456 aaPredicted RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 SLF2Q8IX21 1173 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 CYP2W1Q8TAV3 490 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 ETNPPLQ8TBG4 499 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 PIGOQ8TEQ8 1089 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 TATDN2Q93075 761 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 ARHGEF26Q96DR7 871 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 FAM114A2Q9NRY5 505 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 TMOD4Q9NZQ9 345 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 SWAP70Q9UH65 585 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 CCNL1Q9UK58 526 aaPredicted RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 FAM86B1E9PN63 330 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 ZBTB39O15060 712 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 CHUKO15111 745 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 FAM86B2P0C5J1 330 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 NMT1P30419 496 aaKnown RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 SCTRP47872 440 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 DR1Q01658 176 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 DRAP1Q14919 205 aaPredicted RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 GPATCH4Q5T3I0 446 aaKnown RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 RC3H1Q5TC82 1133 aaKnown RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 PALB2Q86YC2 1186 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 FUKQ8N0W3 1084 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 OLIG1Q8TAK6 271 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 SEC14L1Q92503 715 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 SELENOSQ9BQE4 189 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 CXorf56Q9H5V9 222 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 TYW1Q9NV66 732 aaKnown RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 CHORDC1Q9UHD1 332 aaPredicted RBP12.37□□□□□ -0.43
SRP54-213ENST00000556994 SNX24Q9Y343 169 aa12.37□□□□□ -0.43
SRP54-213ENST00000556994 A0A0A6YYK5 440 aaPredicted RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 TGFB1I1O43294 461 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 CTNND1O60716 968 aaKnown RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 FERP16591 822 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 DRD4P21917 467 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 ATP2B4P23634 1241 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 RPA1P27694 616 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 RDXP35241 583 aaKnown RBP12.36□□□□□ -0.43
SRP54-213ENST00000556994 PLCB4Q15147 1175 aa12.36□□□□□ -0.43
SRP54-213ENST00000556994 ARHGAP44Q17R89 818 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms