RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 ATP4AP20648 1035 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 ZNF131P52739 623 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 OR6J1Q8NGC5 347 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 ENOX1Q8TC92 643 aaKnown RBP26.29■■□□□ 1.8
SIX4-203ENST00000556952 GLG1Q92896 1179 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 NIFKQ9BYG3 293 aaKnown RBP26.29■■□□□ 1.8
SIX4-203ENST00000556952 SMARCAD1Q9H4L7 1026 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 CYP26B1Q9NR63 512 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 NRBP2Q9NSY0 501 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 SEL1LQ9UBV2 794 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 PPME1Q9Y570 386 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 TMEM150BA6NC51 233 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 PSMA7O14818 248 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 USO1O60763 962 aaKnown RBP26.29■■□□□ 1.8
SIX4-203ENST00000556952 FAM13AO94988 1023 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 TFRCP02786 760 aaKnown RBP26.29■■□□□ 1.8
SIX4-203ENST00000556952 NPEPPSP55786 919 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 TPM4P67936 248 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 PAK1Q13153 545 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 PARVGQ9HBI0 331 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 SLC39A2Q9NP94 309 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 OLFML3Q9NRN5 406 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 OGDHLQ9ULD0 1010 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 FAM184BQ9ULE4 1060 aa26.29■■□□□ 1.8
SIX4-203ENST00000556952 GNEQ9Y223 722 aaKnown RBP26.29■■□□□ 1.8
SIX4-203ENST00000556952 SYNRGQ9UMZ2 1314 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 MSCO60682 206 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 DGAT1O75907 488 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 HOXD8P13378 290 aaPredicted RBP26.28■■□□□ 1.8
SIX4-203ENST00000556952 PTGS1P23219 599 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 KLHL10Q6JEL2 608 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 AFG1LQ8WV93 481 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 DHTKD1Q96HY7 919 aaPredicted RBP26.28■■□□□ 1.8
SIX4-203ENST00000556952 ZHX3Q9H4I2 956 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 RWDD2AQ9UIY3 292 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 Q9Y3F1 56 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 PCDHA2Q9Y5H9 948 aa26.28■■□□□ 1.8
SIX4-203ENST00000556952 RSPH10B2B2RC85 870 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 HIP1RO75146 1068 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 RSPH10BP0C881 870 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 NCAPHQ15003 741 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 TRMT1LQ7Z2T5 733 aaKnown RBP26.27■■□□□ 1.8
SIX4-203ENST00000556952 SFR1Q86XK3 245 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 GUF1Q8N442 669 aaKnown RBP26.27■■□□□ 1.8
SIX4-203ENST00000556952 BBXQ8WY36 941 aaPredicted RBP26.27■■□□□ 1.8
SIX4-203ENST00000556952 HPS3Q969F9 1004 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 DRC1Q96MC2 740 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 CTNND2Q9UQB3 1225 aa26.27■■□□□ 1.8
SIX4-203ENST00000556952 PPFIA4O75335 1185 aa26.26■■□□□ 1.79
SIX4-203ENST00000556952 KIF20AO95235 890 aa26.26■■□□□ 1.79
SIX4-203ENST00000556952 MAPK7Q13164 816 aa26.26■■□□□ 1.79
SIX4-203ENST00000556952 MCPH1Q8NEM0 835 aa26.26■■□□□ 1.79
SIX4-203ENST00000556952 ATP8B4Q8TF62 1192 aa26.26■■□□□ 1.79
SIX4-203ENST00000556952 ERAP1Q9NZ08 941 aa26.26■■□□□ 1.79
SIX4-203ENST00000556952 LGALS2P05162 132 aa26.25■■□□□ 1.79
SIX4-203ENST00000556952 MMP3P08254 477 aa26.25■■□□□ 1.79
SIX4-203ENST00000556952 TLK2Q86UE8 772 aa26.25■■□□□ 1.79
SIX4-203ENST00000556952 NELFBQ8WX92 580 aa26.25■■□□□ 1.79
SIX4-203ENST00000556952 SH2D3AQ9BRG2 576 aa26.25■■□□□ 1.79
SIX4-203ENST00000556952 MAPK8IP1Q9UQF2 711 aa26.25■■□□□ 1.79
SIX4-203ENST00000556952 RARBP10826 455 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 MNX1P50219 401 aaPredicted RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 MTERF2Q49AM1 385 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 TRIM50Q86XT4 487 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 DAW1Q8N136 415 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 MYCT1Q8N699 235 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 ATP6V0A4Q9HBG4 840 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 LARSQ9P2J5 1176 aaKnown RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 BICDL2A1A5D9 508 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 RFC5P40937 340 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 IRX5P78411 483 aaPredicted RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 TARBP2Q15633 366 aaKnown RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 DGKDQ16760 1214 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 SPATA1Q5VX52 437 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 MYOCDQ8IZQ8 938 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 DIS3LQ8TF46 1054 aaKnown RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 ANP32BQ92688 251 aaKnown RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 XPNPEP3Q9NQH7 507 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 PDLIM7Q9NR12 457 aa26.24■■□□□ 1.79
SIX4-203ENST00000556952 ZNF215Q9UL58 517 aaPredicted RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 TNRC18O15417 2968 aaPredicted RBP26.24■■□□□ 1.79
SIX4-203ENST00000556952 DNAH12Q6ZR08 3092 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 A6NJR5 290 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 PGK1P00558 417 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 PLCB4Q15147 1175 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 EXOC8Q8IYI6 725 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 KIFAP3Q92845 792 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 MED15Q96RN5 788 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 MRPL44Q9H9J2 332 aaKnown RBP26.23■■□□□ 1.79
SIX4-203ENST00000556952 TBC1D7Q9P0N9 293 aa26.23■■□□□ 1.79
SIX4-203ENST00000556952 DYNC1LI2O43237 492 aaPredicted RBP26.22■■□□□ 1.79
SIX4-203ENST00000556952 MAPTP10636 758 aaKnown RBP26.22■■□□□ 1.79
SIX4-203ENST00000556952 CCNE1P24864 410 aa26.22■■□□□ 1.79
SIX4-203ENST00000556952 MARK3P27448 753 aa26.22■■□□□ 1.79
SIX4-203ENST00000556952 POLGP54098 1239 aaPredicted RBP26.22■■□□□ 1.79
SIX4-203ENST00000556952 FOXR2Q6PJQ5 311 aa26.22■■□□□ 1.79
SIX4-203ENST00000556952 P2RX5Q93086 422 aa26.22■■□□□ 1.79
SIX4-203ENST00000556952 CEP89Q96ST8 783 aa26.22■■□□□ 1.79
SIX4-203ENST00000556952 DHX33Q9H6R0 707 aaKnown RBP26.22■■□□□ 1.79
SIX4-203ENST00000556952 C17orf75Q9HAS0 396 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms