RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 CALM1P0DP23 149 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 CALM2P0DP24 149 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 CALM3P0DP25 149 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 MCM5P33992 734 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 PBX3P40426 434 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 PLCB3Q01970 1234 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 CEP55Q53EZ4 464 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 ODR4Q5SWX8 454 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 LRRC55Q6ZSA7 311 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 FAM43BQ6ZT52 329 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 TMTC3Q6ZXV5 915 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 FAM228AQ86W67 206 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 CCDC60Q8IWA6 550 aaPredicted RBP10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 TMTC2Q8N394 836 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 KREMEN2Q8NCW0 462 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 EXOC6Q8TAG9 804 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 RASGRP4Q8TDF6 673 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 MAP4K1Q92918 833 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 OSMRQ99650 979 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 MTA3Q9BTC8 594 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 NGRNQ9NPE2 291 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 TMEM161AQ9NX61 479 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 LZTS1Q9Y250 596 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 RBM8AQ9Y5S9 174 aaKnown RBP10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 SLC12A7Q9Y666 1083 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 EVPLQ92817 2033 aa10.29□□□□□ -0.76
HNRNPC-227ENST00000556897 MEIS1O00470 390 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 GALR2O43603 387 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 BRD1O95696 1058 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 VTNP04004 478 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 HOXB8P17481 243 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 NUBP1P53384 320 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 CRYBB1P53674 252 aaPredicted RBP10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 FAM189BP81408 668 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 MTMR3Q13615 1198 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 TPRNQ4KMQ1 711 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 FAM160B1Q5W0V3 765 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 WWC2Q6AWC2 1192 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 TYW1BQ6NUM6 668 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 PDXDC2PQ6P474 469 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 KCNT2Q6UVM3 1135 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 ABHD15Q6UXT9 468 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 TRMT1LQ7Z2T5 733 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 MICU3Q86XE3 530 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 METTL13Q8N6R0 699 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 FANCBQ8NB91 859 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 TMEM87BQ96K49 555 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 LRRC2Q9BYS8 371 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 TMEM117Q9H0C3 514 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 SMOC2Q9H3U7 446 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 ELAC1Q9H777 363 aaKnown RBP10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 RIC8AQ9NPQ8 531 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 ZNF302Q9NR11 478 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 SORCS3Q9UPU3 1222 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 NR2E1Q9Y466 385 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 HCFC2Q9Y5Z7 792 aa10.28□□□□□ -0.76
HNRNPC-227ENST00000556897 PLXNA3P51805 1871 aa10.27□□□□□ -0.76
HNRNPC-227ENST00000556897 COL1A2P08123 1366 aa10.27□□□□□ -0.76
HNRNPC-227ENST00000556897 GVINP1Q7Z2Y8 2422 aa10.27□□□□□ -0.76
HNRNPC-227ENST00000556897 C2CD4DB7Z1M9 353 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 PROB1E7EW31 1015 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 GPR32O75388 356 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 C22orf31O95567 290 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ATP4AP20648 1035 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 PPM1AP35813 382 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 LIFRP42702 1097 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 NAPAP54920 295 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 KRT17Q04695 432 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 DSC3Q14574 896 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ZNF484Q5JVG2 852 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 SWSAP1Q6NVH7 229 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 MIS18BP1Q6P0N0 1132 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ASCL5Q7RTU5 278 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 TMC7Q7Z402 723 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 CKAP2LQ8IYA6 745 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 UBALD2Q8IYN6 164 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ABI1Q8IZP0 508 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 LRRC43Q8N309 656 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 TMEM105Q8N8V8 129 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 RNF169Q8NCN4 708 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 CASP10Q92851 521 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ZNF558Q96NG5 402 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 CASD1Q96PB1 797 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ANO3Q9BYT9 981 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 ADAM7Q9H2U9 754 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 POMKQ9H5K3 350 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 RNF19AQ9NV58 838 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 SSUH2Q9Y2M2 353 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 VPS13AQ96RL7 3174 aa10.27□□□□□ -0.77
HNRNPC-227ENST00000556897 C2orf71A6NGG8 1288 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 FAM86B1E9PN63 330 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 DHX15O43143 795 aaKnown RBP10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 HOXA2O43364 376 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 FOSP01100 380 aaPredicted RBP10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 ASGR2P07307 311 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 WEE2P0C1S8 567 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 FAM86B2P0C5J1 330 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 ZNF76P36508 570 aa10.26□□□□□ -0.77
HNRNPC-227ENST00000556897 SREBF1P36956 1147 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms