RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 TLR9Q9NR96 1032 aa5.95□□□□□ -1.46
PRPF39-210ENST00000556718 INHBCP55103 352 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 TUBA3CQ13748 450 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 YOD1Q5VVQ6 348 aaPredicted RBP5.94□□□□□ -1.46
PRPF39-210ENST00000556718 TUBA3EQ6PEY2 450 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 DPP8Q6V1X1 898 aaPredicted RBP5.94□□□□□ -1.46
PRPF39-210ENST00000556718 SCYL1Q96KG9 808 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 EXOC2Q96KP1 924 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 CAAP1Q9H8G2 361 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 TYW1Q9NV66 732 aaKnown RBP5.94□□□□□ -1.46
PRPF39-210ENST00000556718 RIC8BQ9NVN3 520 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 ARHGAP28Q9P2N2 729 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 HECAQ9UBI9 543 aaPredicted RBP5.94□□□□□ -1.46
PRPF39-210ENST00000556718 MCM8Q9UJA3 840 aa5.94□□□□□ -1.46
PRPF39-210ENST00000556718 MARCH6O60337 910 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 RAPGEF3O95398 923 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 S100BP04271 92 aaPredicted RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 PDE6AP16499 860 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 PTPN1P18031 435 aaKnown RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 HIBADHP31937 336 aaKnown RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 MC4RP32245 332 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 FOXB2Q5VYV0 432 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 ZNF627Q7L945 461 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 GPR135Q8IZ08 494 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 PRPF38AQ8NAV1 312 aaKnown RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 INTS7Q9NVH2 962 aaKnown RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 DDX56Q9NY93 547 aaKnown RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 PLA2G3Q9NZ20 509 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 MAGEC2Q9UBF1 373 aaPredicted RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 SFMBT1Q9UHJ3 866 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 PUF60Q9UHX1 559 aaKnown RBP5.93□□□□□ -1.46
PRPF39-210ENST00000556718 CDC42EP3Q9UKI2 254 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 TRAF6Q9Y4K3 522 aa5.93□□□□□ -1.46
PRPF39-210ENST00000556718 PDE8AO60658 829 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 EFCAB14O75071 495 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 HMGCRP04035 888 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 CPEP16870 476 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 RPS19P39019 145 aaKnown RBP5.92□□□□□ -1.46
PRPF39-210ENST00000556718 STAT3P40763 770 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 ARHGAP36Q6ZRI8 547 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 AGAP2Q99490 1192 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 HOMER2Q9NSB8 354 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 CEP72Q9P209 647 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 SRPK3Q9UPE1 567 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 MAPRE3Q9UPY8 281 aa5.92□□□□□ -1.46
PRPF39-210ENST00000556718 MAN2B1O00754 1011 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 AMY2AP04746 511 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 ADH4P08319 380 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 AMY2BP19961 511 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 PTGS1P23219 599 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 GABREP78334 506 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 PCSK4Q6UW60 755 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 USP30Q70CQ3 517 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 THNSL2Q86YJ6 484 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 RPUSD2Q8IZ73 545 aaKnown RBP5.91□□□□□ -1.46
PRPF39-210ENST00000556718 AHI1Q8N157 1196 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 ZNF483Q8TF39 744 aaPredicted RBP5.91□□□□□ -1.46
PRPF39-210ENST00000556718 INCENPQ9NQS7 918 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 ATP8A1Q9Y2Q0 1164 aa5.91□□□□□ -1.46
PRPF39-210ENST00000556718 FLT3P36888 993 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 PCOLCEQ15113 449 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 PLEKHG6Q3KR16 790 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 CNNM4Q6P4Q7 775 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 NOL8Q76FK4 1167 aaKnown RBP5.9□□□□□ -1.46
PRPF39-210ENST00000556718 LRRTM3Q86VH5 581 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 PTRH1Q86Y79 214 aaKnown RBP5.9□□□□□ -1.46
PRPF39-210ENST00000556718 PPM1KQ8N3J5 372 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 OR14K1Q8NGZ2 314 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 ALG1Q9BT22 464 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 AGO3Q9H9G7 860 aaKnown RBP5.9□□□□□ -1.46
PRPF39-210ENST00000556718 GALNT8Q9NY28 637 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 KLHL42Q9P2K6 505 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 NDOR1Q9UHB4 597 aa5.9□□□□□ -1.46
PRPF39-210ENST00000556718 ALG1L2C9J202 215 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 KCNK3O14649 394 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 MPIG6BO95866 241 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 PDGFRBP09619 1106 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 KRT15P19012 456 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 EIF4HQ15056 248 aaKnown RBP5.89□□□□□ -1.47
PRPF39-210ENST00000556718 STILQ15468 1287 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 SPTY2D1Q68D10 685 aaPredicted RBP5.89□□□□□ -1.47
PRPF39-210ENST00000556718 TRIM68Q6AZZ1 485 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 SGMS1Q86VZ5 419 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 OSTM1Q86WC4 334 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 DNAJC10Q8IXB1 793 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 ATL2Q8NHH9 583 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 CLIP3Q96DZ5 547 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 TMEM176AQ96HP8 235 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 WNK4Q96J92 1243 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 AMNQ9BXJ7 453 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 ZNF703Q9H7S9 590 aaPredicted RBP5.89□□□□□ -1.47
PRPF39-210ENST00000556718 SLC2A4RGQ9NR83 387 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 BTBD7Q9P203 1132 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 DMRT1Q9Y5R6 373 aa5.89□□□□□ -1.47
PRPF39-210ENST00000556718 A0A087X0B3 334 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 OPA1O60313 960 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 C4BPAP04003 597 aaKnown RBP5.88□□□□□ -1.47
PRPF39-210ENST00000556718 NAT1P18440 290 aa5.88□□□□□ -1.47
PRPF39-210ENST00000556718 KRT4P19013 534 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms