RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 TAF1P21675 1872 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 PLS3P13797 630 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 GYS1P13807 737 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 ATF4P18848 351 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-243ENST00000556671 NCAPHQ15003 741 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 MBLAC2Q68D91 279 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 KIF6Q6ZMV9 814 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 TRIM59Q8IWR1 403 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 ADGRG2Q8IZP9 1017 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 USP33Q8TEY7 942 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 ZNF526Q8TF50 670 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-243ENST00000556671 TSR2Q969E8 191 aaKnown RBP5.97□□□□□ -1.45
ATXN3-243ENST00000556671 MRGPRX3Q96LB0 322 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 CCSER2Q9H7U1 834 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 GPRC5CQ9NQ84 441 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 NARFQ9UHQ1 456 aa5.97□□□□□ -1.45
ATXN3-243ENST00000556671 SOS1Q07889 1333 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-243ENST00000556671 COL24A1Q17RW2 1714 aa5.96□□□□□ -1.45
ATXN3-243ENST00000556671 COL15A1P39059 1388 aa5.96□□□□□ -1.45
ATXN3-243ENST00000556671 A0A0G2JLW4 131 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 A0A1B0GTL3 188 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 CHL1O00533 1208 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 NOP56O00567 594 aaKnown RBP5.96□□□□□ -1.46
ATXN3-243ENST00000556671 FUCA1P04066 466 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 NTRK1P04629 796 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 SERPINB2P05120 415 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 IL6STP40189 918 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-243ENST00000556671 RBM25P49756 843 aaKnown RBP5.96□□□□□ -1.46
ATXN3-243ENST00000556671 EIF5P55010 431 aaKnown RBP5.96□□□□□ -1.46
ATXN3-243ENST00000556671 CACNB2Q08289 660 aaPredicted RBP5.96□□□□□ -1.46
ATXN3-243ENST00000556671 GTF2IRD2BQ6EKJ0 949 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 GTF2IRD2Q86UP8 949 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 SMARCC2Q8TAQ2 1214 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 PLEKHO2Q8TD55 490 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 CYP26B1Q9NR63 512 aa5.96□□□□□ -1.46
ATXN3-243ENST00000556671 ANKRD36CQ5JPF3 1778 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 CCER2I3L3R5 266 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 THBDP07204 575 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 CELA3BP08861 270 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 GPTP24298 496 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 CYP4F3Q08477 520 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 HLFQ16534 295 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 ERICH6BQ5W0A0 696 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 TBC1D9BQ66K14 1250 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 TTLL7Q6ZT98 887 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 COPS6Q7L5N1 327 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 C8orf58Q8NAV2 365 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 DPF3Q92784 378 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 ZNF622Q969S3 477 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-243ENST00000556671 SPATA25Q9BR10 227 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 NKX2-4Q9H2Z4 354 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 IFT57Q9NWB7 429 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 BABAM1Q9NWV8 329 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 NIP7Q9Y221 180 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATXN3-243ENST00000556671 ZNF652Q9Y2D9 606 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 SIT1Q9Y3P8 196 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 BCORQ6W2J9 1755 aa5.95□□□□□ -1.46
ATXN3-243ENST00000556671 CICQ96RK0 1608 aaPredicted RBP5.95□□□□□ -1.46
ATXN3-243ENST00000556671 USP42Q9H9J4 1324 aaKnown RBP5.95□□□□□ -1.46
ATXN3-243ENST00000556671 ANKRD31Q8N7Z5 1873 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 TM4SF1P30408 202 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 EXOSC9Q06265 439 aaKnown RBP5.94□□□□□ -1.46
ATXN3-243ENST00000556671 INF2Q27J81 1249 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 ZFYVE27Q5T4F4 411 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 NT5DC1Q5TFE4 455 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 NBPF5PQ86XG9 351 aaPredicted RBP5.94□□□□□ -1.46
ATXN3-243ENST00000556671 DCP2Q8IU60 420 aaKnown RBP5.94□□□□□ -1.46
ATXN3-243ENST00000556671 WDR63Q8IWG1 891 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 CARFQ8N187 725 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 NPLOC4Q8TAT6 608 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 FRS2Q8WU20 508 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 NOX5Q96PH1 765 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 LGR4Q9BXB1 951 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 STK31Q9BXU1 1019 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 MARCH2Q9P0N8 246 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 CHPF2Q9P2E5 772 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 CD2APQ9Y5K6 639 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 KIF13BQ9NQT8 1826 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 SBF1O95248 1867 aa5.94□□□□□ -1.46
ATXN3-243ENST00000556671 MYH3P11055 1940 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 ARFGEF2Q9Y6D5 1785 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 SPEF2Q9C093 1822 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 H0YIN7 160 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 PRICKLE3O43900 615 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 CAMTA2O94983 1202 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 DPEP1P16444 411 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 CHRNA5P30532 468 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 ST5P78524 1137 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 DDR1Q08345 913 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 RTP5Q14D33 572 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 PROSER3Q2NL68 480 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 TWISTNBQ3B726 338 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 CCDC30Q5VVM6 783 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 C6orf15Q6UXA7 325 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 PRRT2Q7Z6L0 340 aaPredicted RBP5.93□□□□□ -1.46
ATXN3-243ENST00000556671 C2CD5Q86YS7 1000 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 TSPYL6Q8N831 410 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 PPP1R14AQ96A00 147 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 MYH16Q9H6N6 1097 aa5.93□□□□□ -1.46
ATXN3-243ENST00000556671 CAPN10Q9HC96 672 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms