RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 MTCH2Q9Y6C9 303 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 CDY2AQ9Y6F7 541 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 MYO9BQ13459 2157 aa8.73□□□□□ -1.01
HNRNPC-226ENST00000556628 SMIM35A0A1B0GVV1 85 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 MBLAC1A4D2B0 266 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 IPO5O00410 1097 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 HBP1O60381 514 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 EIF5BO60841 1220 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ATG7O95352 703 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 POU3F3P20264 500 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ERVK-21P61565 698 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 MRPS6P82932 125 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 GRB10Q13322 594 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ITGB3BPQ13352 177 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 PLCB4Q15147 1175 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 NTRK3Q16288 839 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 PKN1Q16512 942 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 PDXDC2PQ6P474 469 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 TSHZ1Q6ZSZ6 1077 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 GDPD5Q8WTR4 605 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 TOP1MTQ969P6 601 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ZNF274Q96GC6 653 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ASB2Q96Q27 587 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 PCYT2Q99447 389 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 FAM49AQ9H0Q0 323 aaPredicted RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 ZNF302Q9NR11 478 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 SH3GLB2Q9NR46 395 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 LMCD1Q9NZU5 365 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 VPS54Q9P1Q0 977 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 COG5Q9UP83 839 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 TRPV2Q9Y5S1 764 aa8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 MYH9P35579 1960 aaKnown RBP8.72□□□□□ -1.01
HNRNPC-226ENST00000556628 NLRC5Q86WI3 1866 aa8.71□□□□□ -1.01
HNRNPC-226ENST00000556628 EPOPA6NHQ4 379 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 FAM86B1E9PN63 330 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 PPFIA3O75145 1194 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 DEXIO95424 95 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 CHRNA1P02708 482 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 PSAPP07602 524 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 FAM86B2P0C5J1 330 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 EVCP57679 992 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 HTRA4P83105 476 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 KRT76Q01546 638 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 MGAT3Q09327 533 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 STK3Q13188 491 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 LPIN1Q14693 890 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 PUS10Q3MIT2 529 aaKnown RBP8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 PRR16Q569H4 304 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 ZNF484Q5JVG2 852 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 FBXO47Q5MNV8 452 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 ODR4Q5SWX8 454 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 MARCH8Q5T0T0 291 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 ZNF746Q6NUN9 644 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 SWSAP1Q6NVH7 229 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 ABHD15Q6UXT9 468 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 SMAP1Q8IYB5 467 aaPredicted RBP8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 NME8Q8N427 588 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 FIBCD1Q8N539 461 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 FTHL17Q9BXU8 183 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 UPF3BQ9BZI7 483 aaKnown RBP8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 PDRG1Q9NUG6 133 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 SAMM50Q9Y512 469 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 PCDHA2Q9Y5H9 948 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 SQORQ9Y6N5 450 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 COL1A2P08123 1366 aa8.71□□□□□ -1.02
HNRNPC-226ENST00000556628 COL6A3P12111 3177 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 IGLV3-22A0A075B6J6 115 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 IGKV6D-21A0A0A0MT36 114 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 CDKL5O76039 1030 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 XBP1P17861 261 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 KLRC1P26715 233 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 CD52P31358 61 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 USP11P51784 963 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 ANKRD1Q15327 319 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 PTPROQ16827 1216 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 MTHFD1LQ6UB35 978 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 SPRED2Q7Z698 418 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 CCDC60Q8IWA6 550 aaPredicted RBP8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 RASGRP4Q8TDF6 673 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 ATP8B4Q8TF62 1192 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 TRAPPC12Q8WVT3 735 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 CRYGNQ8WXF5 182 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 HLA-CQ95604 372 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 IL17RAQ96F46 866 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 UIMC1Q96RL1 719 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 C17orf80Q9BSJ5 609 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 CELF4Q9BZC1 486 aaKnown RBP8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 OSBPL7Q9BZF2 842 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 SUGCTQ9HAC7 445 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 AAASQ9NRG9 546 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 CEP131Q9UPN4 1083 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 RWDD3Q9Y3V2 267 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 PCDHA10Q9Y5I2 948 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 RALGAPA2Q2PPJ7 1873 aa8.7□□□□□ -1.02
HNRNPC-226ENST00000556628 LOXHD1Q8IVV2 1947 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms