RNA–Protein interactions for RNA: ENST00000556533.5

PSEN1-217, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-217ENST00000556533 PDIA5Q14554 519 aa19.09■□□□□ 0.65
PSEN1-217ENST00000556533 TMCO2Q7Z6W1 182 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-217ENST00000556533 SLC7A3Q8WY07 619 aa19.09■□□□□ 0.65
PSEN1-217ENST00000556533 POLR3CQ9BUI4 534 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-217ENST00000556533 AGO3Q9H9G7 860 aaKnown RBP19.09■□□□□ 0.65
PSEN1-217ENST00000556533 TUFT1Q9NNX1 390 aa19.09■□□□□ 0.65
PSEN1-217ENST00000556533 SUCLA2Q9P2R7 463 aaPredicted RBP19.09■□□□□ 0.65
PSEN1-217ENST00000556533 VWA3AA6NCI4 1184 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 PP2D1A8MPX8 630 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 LYPLA2O95372 231 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 PBX2P40425 430 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 PRPHP41219 470 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 ATP2C1P98194 919 aaPredicted RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 CEBPZQ03701 1054 aaKnown RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 NFX1Q12986 1120 aaKnown RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 PAK2Q13177 524 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 MKRN4PQ13434 485 aaPredicted RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 SF3A1Q15459 793 aaKnown RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 ZRSR1Q15695 479 aaKnown RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 POTEGQ6S5H5 508 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 TSHZ1Q6ZSZ6 1077 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 LINC01465Q8N7H1 131 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 TMEM143Q96AN5 459 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 OSMRQ99650 979 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 JPH2Q9BR39 696 aaPredicted RBP19.08■□□□□ 0.64
PSEN1-217ENST00000556533 ZBED2Q9BTP6 218 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 ANKEF1Q9NU02 776 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 MSRAQ9UJ68 235 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 SCN5AQ14524 2016 aa19.08■□□□□ 0.64
PSEN1-217ENST00000556533 EFCAB14O75071 495 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 GPR32O75388 356 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 RPA1P27694 616 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 CDC25AP30304 524 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 RFC5P40937 340 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 CRYBB1P53674 252 aaPredicted RBP19.07■□□□□ 0.64
PSEN1-217ENST00000556533 DEFB103AP81534 67 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 KRT79Q5XKE5 535 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 HAUS3Q68CZ6 603 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 FAM117BQ6P1L5 589 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 EXOC8Q8IYI6 725 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 USP38Q8NB14 1042 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 SNX29Q8TEQ0 813 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 NLRP7Q8WX94 980 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 APBB2Q92870 758 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 NACC1Q96RE7 527 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 SLC9A7Q96T83 725 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 PADI3Q9ULW8 664 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 NOC2LQ9Y3T9 749 aaKnown RBP19.07■□□□□ 0.64
PSEN1-217ENST00000556533 CLIC4Q9Y696 253 aa19.07■□□□□ 0.64
PSEN1-217ENST00000556533 IGKV6-21A0A0C4DH24 114 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 RPS6KA5O75582 802 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 AMHP03971 560 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 MYOGP15173 224 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 IBSPP21815 317 aaPredicted RBP19.06■□□□□ 0.64
PSEN1-217ENST00000556533 EMC2Q15006 297 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 Q7L0L9 218 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 RHPN2Q8IUC4 686 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 KSR1Q8IVT5 923 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 HERC6Q8IVU3 1022 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 MYOCDQ8IZQ8 938 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 IGSF22Q8N9C0 903 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 PHOSPHO2Q8TCD6 241 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 TMEM40Q8WWA1 233 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 FAM161BQ96MY7 647 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 PBX4Q9BYU1 374 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 ADAMTS10Q9H324 1103 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 ZSCAN16Q9H4T2 348 aaPredicted RBP19.06■□□□□ 0.64
PSEN1-217ENST00000556533 KIAA1024Q9UPX6 916 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 PPME1Q9Y570 386 aa19.06■□□□□ 0.64
PSEN1-217ENST00000556533 KDM3AQ9Y4C1 1321 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 KAT6AQ92794 2004 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 UPP2O95045 317 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 BMP15O95972 392 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 XRCC6P12956 609 aaKnown RBP eCLIP19.05■□□□□ 0.64
PSEN1-217ENST00000556533 DNAJB2P25686 324 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 GPC3P51654 580 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 BECN1Q14457 450 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 FOXD4L6Q3SYB3 417 aaPredicted RBP19.05■□□□□ 0.64
PSEN1-217ENST00000556533 FOXD4L3Q6VB84 417 aaPredicted RBP19.05■□□□□ 0.64
PSEN1-217ENST00000556533 PRPF31Q8WWY3 499 aaKnown RBP19.05■□□□□ 0.64
PSEN1-217ENST00000556533 TIFAQ96CG3 184 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 DHX33Q9H6R0 707 aaKnown RBP19.05■□□□□ 0.64
PSEN1-217ENST00000556533 ST3GAL5Q9UNP4 418 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 STK24Q9Y6E0 443 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 SQORQ9Y6N5 450 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 TANC1Q9C0D5 1861 aa19.05■□□□□ 0.64
PSEN1-217ENST00000556533 ENPP3O14638 875 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 CSDE1O75534 798 aaKnown RBP19.04■□□□□ 0.64
PSEN1-217ENST00000556533 SRGAP2CP0DJJ0 459 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 RARRES1P49788 294 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 RAB30Q15771 203 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 ECM1Q16610 540 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 ARL6IP4Q66PJ3 421 aaKnown RBP19.04■□□□□ 0.64
PSEN1-217ENST00000556533 MAEAQ7L5Y9 396 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 DEFB123Q8N688 67 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 NLRP4Q96MN2 994 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 MTRQ99707 1265 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 NKX2-4Q9H2Z4 354 aa19.04■□□□□ 0.64
PSEN1-217ENST00000556533 DDX19AQ9NUU7 478 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms