RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 FSBPO95073 299 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 AMPD1P23109 780 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 SLC16A2P36021 539 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 CETN2P41208 172 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 BAG6P46379 1132 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ASMTP46597 345 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 POLD2P49005 469 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 DSTNP60981 165 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 KRT83P78385 493 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 FANCCQ00597 558 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 PKN2Q16513 984 aaKnown RBP6.76□□□□□ -1.33
TDP1-215ENST00000556498 NDUFA5Q16718 116 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 RILPL1Q5EBL4 403 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 CEP78Q5JTW2 689 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 THEMIS2Q5TEJ8 643 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ZNF385CQ66K41 422 aaPredicted RBP6.76□□□□□ -1.33
TDP1-215ENST00000556498 FAM117BQ6P1L5 589 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 LVRNQ6Q4G3 990 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 C8orf86Q6ZUL3 223 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 VN1R5Q7Z5H4 357 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 LUZP1Q86V48 1076 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 SPATA24Q86W54 205 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 SLC44A2Q8IWA5 706 aaPredicted RBP6.76□□□□□ -1.33
TDP1-215ENST00000556498 SCYL3Q8IZE3 742 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 IFNL2Q8IZJ0 200 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 TMEM57Q8N5G2 664 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 TOR1AIP2Q8NFQ8 470 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 DEPTORQ8TB45 409 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.76□□□□□ -1.33
TDP1-215ENST00000556498 COG8Q96MW5 612 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 TUBA1CQ9BQE3 449 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 TTPALQ9BTX7 342 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 SMARCAD1Q9H4L7 1026 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ZNF576Q9H609 170 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ARNT2Q9HBZ2 717 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 GALNT8Q9NY28 637 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 EMC3Q9P0I2 261 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 TIMM22Q9Y584 194 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ANGPTL3Q9Y5C1 460 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 EID1Q9Y6B2 187 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 NESP48681 1621 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 NCOA3Q9Y6Q9 1424 aa6.76□□□□□ -1.33
TDP1-215ENST00000556498 ASAP2O43150 1006 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 ZSCAN12O43309 604 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 WIPF1O43516 503 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 TMCC2O75069 709 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CBFA2T3O75081 653 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 SLU7O95391 586 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 OLFM2O95897 454 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 SRGNP10124 158 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 EPB41P11171 864 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 HOXB4P17483 251 aaPredicted RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 CTNNA1P35221 906 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 RRP1P56182 461 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 RAC1P63000 192 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 OLR1P78380 273 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 MSLNQ13421 630 aaPredicted RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 DRP2Q13474 957 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 ITGA7Q13683 1181 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 SPIDRQ14159 915 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 RAB3GAP1Q15042 981 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 SNCBQ16143 134 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 BCL2A1Q16548 175 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 PABPC1LQ4VXU2 614 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 GALNT17Q6IS24 598 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 FBXO38Q6PIJ6 1188 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 BTNL9Q6UXG8 535 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CCDC129Q6ZRS4 1044 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CEP128Q6ZU80 1094 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 RAPH1Q70E73 1250 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 SRGAP1Q7Z6B7 1085 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CAND1Q86VP6 1230 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 REXO1L1PQ8IX06 675 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 OR8H2Q8N162 312 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 VPS52Q8N1B4 723 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 IL22RA1Q8N6P7 574 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 KLHDC4Q8TBB5 520 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 ABHD8Q96I13 439 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CEP295NLQ96MC4 621 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 HNRNPABQ99729 332 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 PLVAPQ9BX97 442 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 AP1M1Q9BXS5 423 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 DRC3Q9H069 523 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CSRNP2Q9H175 543 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 VPS16Q9H269 839 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 CLEC4MQ9H2X3 399 aaPredicted RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 VCX3AQ9NNX9 186 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 AATFQ9NY61 560 aaKnown RBP eCLIP6.75□□□□□ -1.33
TDP1-215ENST00000556498 SLC5A4Q9NY91 659 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 ZC3H7BQ9UGR2 993 aaKnown RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 GRID1Q9ULK0 1009 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.75□□□□□ -1.33
TDP1-215ENST00000556498 SNX8Q9Y5X2 465 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 TOP2BQ02880 1626 aa6.75□□□□□ -1.33
TDP1-215ENST00000556498 GPRASP1Q5JY77 1395 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 LRRD1A4D1F6 860 aa6.74□□□□□ -1.33
TDP1-215ENST00000556498 FAM177BA6PVY3 158 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms