RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 PLPPR4Q7Z2D5 763 aa11.97□□□□□ -0.49
LINC01550-206ENST00000556462 TRIM50Q86XT4 487 aa11.97□□□□□ -0.49
LINC01550-206ENST00000556462 FAM178BQ8IXR5 827 aa11.97□□□□□ -0.49
LINC01550-206ENST00000556462 ARHGAP39Q9C0H5 1083 aa11.97□□□□□ -0.49
LINC01550-206ENST00000556462 AZI2Q9H6S1 392 aa11.97□□□□□ -0.49
LINC01550-206ENST00000556462 XPNPEP1Q9NQW7 623 aa11.97□□□□□ -0.49
LINC01550-206ENST00000556462 LARSQ9P2J5 1176 aaKnown RBP11.97□□□□□ -0.49
LINC01550-206ENST00000556462 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
LINC01550-206ENST00000556462 MYH9P35579 1960 aaKnown RBP11.96□□□□□ -0.49
LINC01550-206ENST00000556462 A0A1B0GTH6 734 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 KCNJ18B7U540 433 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 ADCY6O43306 1168 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 PLS3P13797 630 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 CYP2C19P33261 490 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 PSMC4P43686 418 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 LACTBP83111 547 aaPredicted RBP11.96□□□□□ -0.49
LINC01550-206ENST00000556462 IRF5Q13568 498 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 KCNJ12Q14500 433 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 NR1I3Q14994 352 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 KRT31Q15323 416 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 KNOP1Q1ED39 458 aaKnown RBP11.96□□□□□ -0.49
LINC01550-206ENST00000556462 MTERF2Q49AM1 385 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 ZC2HC1CQ53FD0 456 aaPredicted RBP11.96□□□□□ -0.49
LINC01550-206ENST00000556462 NOC3LQ8WTT2 800 aaKnown RBP11.96□□□□□ -0.49
LINC01550-206ENST00000556462 DRC1Q96MC2 740 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 NRBP1Q9UHY1 535 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.49
LINC01550-206ENST00000556462 EMSYQ7Z589 1322 aa11.96□□□□□ -0.49
LINC01550-206ENST00000556462 EIF3DO15371 548 aaKnown RBP eCLIP11.96□□□□□ -0.5
LINC01550-206ENST00000556462 CBFA2T2O43439 604 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 PPP1R37O75864 691 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 TBC1D8O95759 1140 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 ZNF865P0CJ78 1059 aaPredicted RBP11.96□□□□□ -0.5
LINC01550-206ENST00000556462 MAPTP10636 758 aaKnown RBP11.96□□□□□ -0.5
LINC01550-206ENST00000556462 SOX10P56693 466 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 CAP1Q01518 475 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 SPAG1Q07617 926 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 FAM102BQ5T8I3 360 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 LRRC55Q6ZSA7 311 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 PPTC7Q8NI37 304 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 GLG1Q92896 1179 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 APBA2Q99767 749 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 DHX33Q9H6R0 707 aaKnown RBP11.96□□□□□ -0.5
LINC01550-206ENST00000556462 NRBP2Q9NSY0 501 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.5
LINC01550-206ENST00000556462 NKRFO15226 690 aaKnown RBP eCLIP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 EEF1GP26641 437 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 FCGRTP55899 365 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 FKBP3Q00688 224 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 DRC7Q8IY82 874 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 MCPH1Q8NEM0 835 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 AFG1LQ8WV93 481 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 CTAGE1Q96RT6 745 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 TSG101Q99816 390 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 NTPCRQ9BSD7 190 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 CFHR5Q9BXR6 569 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 SMARCAD1Q9H4L7 1026 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 RTN4Q9NQC3 1192 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 ZBTB42B2RXF5 422 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 PDXKO00764 312 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 TEX33O43247 280 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 TGFB1I1O43294 461 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 XRCC5P13010 732 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 MARK3P27448 753 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 MAP2K2P36507 400 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 VEGFBP49765 207 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 SLC26A2P50443 739 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 PEX3P56589 373 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 HTRA3P83110 453 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 TNFAIP2Q03169 654 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 PLCB4Q15147 1175 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 EDRF1Q3B7T1 1238 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 HS1BP3Q53T59 392 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 KSR1Q8IVT5 923 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 ZC3H3Q8IXZ2 948 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 ATP8B4Q8TF62 1192 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 BBXQ8WY36 941 aaPredicted RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 BSNDQ8WZ55 320 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 KIFAP3Q92845 792 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 IKZF4Q9H2S9 585 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 ST6GALNAC4Q9H4F1 302 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 C17orf75Q9HAS0 396 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 ATP6V0A4Q9HBG4 840 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 GABRQQ9UN88 632 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 GNEQ9Y223 722 aaKnown RBP11.95□□□□□ -0.5
LINC01550-206ENST00000556462 PCDHB13Q9Y5F0 798 aa11.95□□□□□ -0.5
LINC01550-206ENST00000556462 PPFIA4O75335 1185 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 HOXD8P13378 290 aaPredicted RBP11.94□□□□□ -0.5
LINC01550-206ENST00000556462 COPB1P53618 953 aaKnown RBP11.94□□□□□ -0.5
LINC01550-206ENST00000556462 POLGP54098 1239 aaPredicted RBP11.94□□□□□ -0.5
LINC01550-206ENST00000556462 NCKAP1LP55160 1127 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 RTP1P59025 263 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 PTPN21Q16825 1174 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 PPP4R3CPQ6ZMV5 832 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 CREBRFQ8IUR6 639 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 TRIM44Q96DX7 344 aaPredicted RBP11.94□□□□□ -0.5
LINC01550-206ENST00000556462 FAM167AQ96KS9 214 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 CNOT6LQ96LI5 555 aaKnown RBP11.94□□□□□ -0.5
LINC01550-206ENST00000556462 C16orf70Q9BSU1 422 aa11.94□□□□□ -0.5
LINC01550-206ENST00000556462 VPS16Q9H269 839 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms