RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 EP300Q09472 2414 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-219ENST00000556432 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 DDX39AO00148 427 aaKnown RBP15.89■□□□□ 0.13
ACTN1-219ENST00000556432 DDAH1O94760 285 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 PLEKHA8P1O95397 391 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 CYP21A2P08686 494 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 FAM160B1Q5W0V3 765 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 NFXL1Q6ZNB6 911 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 FAM228AQ86W67 206 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 C12orf76Q8N812 135 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-219ENST00000556432 OSBPL3Q9H4L5 887 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 ELAC1Q9H777 363 aaKnown RBP15.89■□□□□ 0.13
ACTN1-219ENST00000556432 FBXL21Q9UKT6 434 aa15.89■□□□□ 0.13
ACTN1-219ENST00000556432 DCHS1Q96JQ0 3298 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 hCG_1642624A0A1W2PR95 340 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 C2orf71A6NGG8 1288 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 HBP1O60381 514 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 CLASP2O75122 1294 aaKnown RBP15.88■□□□□ 0.13
ACTN1-219ENST00000556432 GNAQP50148 359 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 SLC26A2P50443 739 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 CRYBB1P53674 252 aaPredicted RBP15.88■□□□□ 0.13
ACTN1-219ENST00000556432 ATAT1Q5SQI0 421 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 LRRC55Q6ZSA7 311 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 CKAP2LQ8IYA6 745 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 ZDHHC14Q8IZN3 488 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 CMTR1Q8N1G2 835 aaKnown RBP15.88■□□□□ 0.13
ACTN1-219ENST00000556432 PLCD3Q8N3E9 789 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 METTL13Q8N6R0 699 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 MRPL43Q8N983 215 aaKnown RBP15.88■□□□□ 0.13
ACTN1-219ENST00000556432 CYP2W1Q8TAV3 490 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 CASD1Q96PB1 797 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 MXRA8Q9BRK3 442 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 NFASCO94856 1347 aa15.88■□□□□ 0.13
ACTN1-219ENST00000556432 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-219ENST00000556432 E7EWF7 191 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 VTNP04004 478 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 ZSCAN20P17040 1043 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-219ENST00000556432 RFX1P22670 979 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 FAM189BP81408 668 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 ANGPT1Q15389 498 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 PDXDC2PQ6P474 469 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 CASC1Q6TDU7 716 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 TRMT1LQ7Z2T5 733 aaKnown RBP15.87■□□□□ 0.13
ACTN1-219ENST00000556432 CCDC82Q8N4S0 544 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 MAP3K14Q99558 947 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 RWDD1Q9H446 243 aaPredicted RBP15.87■□□□□ 0.13
ACTN1-219ENST00000556432 DZANK1Q9NVP4 752 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 TAF6LQ9Y6J9 622 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 COL1A2P08123 1366 aa15.87■□□□□ 0.13
ACTN1-219ENST00000556432 STK25O00506 426 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 CXCL14O95715 111 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 ARP10275 920 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 RXRAP19793 462 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 SMARCA1P28370 1054 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 METAP2P50579 478 aaKnown RBP eCLIP15.86■□□□□ 0.131e-7■■■■■ 29
ACTN1-219ENST00000556432 ANTXR2P58335 489 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 NUCB1Q02818 461 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 ITGB3BPQ13352 177 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-219ENST00000556432 ZNF484Q5JVG2 852 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 CWF19L1Q69YN2 538 aaKnown RBP15.86■□□□□ 0.13
ACTN1-219ENST00000556432 KIAA1841Q6NSI8 718 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 KANK3Q6NY19 840 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 CCDC105Q8IYK2 499 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 SRBD1Q8N5C6 995 aaKnown RBP15.86■□□□□ 0.13
ACTN1-219ENST00000556432 IGDCC4Q8TDY8 1250 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 ACSF2Q96CM8 615 aaPredicted RBP15.86■□□□□ 0.13
ACTN1-219ENST00000556432 PGBD1Q96JS3 809 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 HINFPQ9BQA5 517 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 LY9Q9HBG7 655 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 AGO4Q9HCK5 861 aaKnown RBP15.86■□□□□ 0.13
ACTN1-219ENST00000556432 ZNF302Q9NR11 478 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 CYP26B1Q9NR63 512 aa15.86■□□□□ 0.13
ACTN1-219ENST00000556432 CCDC69A6NI79 296 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 PI15O43692 258 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 EOMESO95936 686 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 ZNF76P36508 570 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 ALDH7A1P49419 539 aaKnown RBP15.85■□□□□ 0.13
ACTN1-219ENST00000556432 PTH1RQ03431 593 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 DSC3Q14574 896 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 TMC5Q6UXY8 1006 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 DGLUCYQ7Z3D6 616 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 CABP7Q86V35 215 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 RAB11FIP4Q86YS3 637 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 SMC5Q8IY18 1101 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 SIX5Q8N196 739 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 SLC39A11Q8N1S5 342 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 DTWD2Q8NBA8 298 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 RUFY2Q8WXA3 655 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 AUTS2Q8WXX7 1259 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 TMEM169Q96HH4 297 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 SCLT1Q96NL6 688 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 RNF19AQ9NV58 838 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 TCEAL9Q9UHQ7 104 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 AKT3Q9Y243 479 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 USTQ9Y2C2 406 aa15.85■□□□□ 0.13
ACTN1-219ENST00000556432 ZNF292O60281 2723 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 NT5C1B-RDH14C9J2C7 533 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 C22orf31O95567 290 aa15.84■□□□□ 0.13
ACTN1-219ENST00000556432 CCNE2O96020 404 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms