RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 DDX58O95786 925 aaKnown RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 DBHP09172 617 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 IFIT2P09913 472 aaKnown RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 ZKSCAN1P17029 563 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 L1CAMP32004 1257 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 HSPA4P34932 840 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 UBE2HP62256 183 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 ANKRD1Q15327 319 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 SASS6Q6UVJ0 657 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 UNC5AQ6ZN44 842 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 G2E3Q7L622 706 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 COL23A1Q86Y22 540 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 KCNH5Q8NCM2 988 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 RASGRP4Q8TDF6 673 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 LTV1Q96GA3 475 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 ZSCAN31Q96LW9 406 aaPredicted RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 PTCHD1Q96NR3 888 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 MIS18AQ9NYP9 233 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 WHRNQ9P202 907 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 DDX41Q9UJV9 622 aaKnown RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 NOL7Q9UMY1 257 aaKnown RBP5.17□□□□□ -1.58
ATXN3-241ENST00000556374 SALL3Q9BXA9 1300 aa5.17□□□□□ -1.58
ATXN3-241ENST00000556374 CCDC88AQ3V6T2 1871 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PNMA6EA0A0J9YXQ4 647 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 A0A1W2PQJ5 194 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 NUDT19A8MXV4 375 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 H0Y8X5 98 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 ZNF500O60304 480 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 NCAM1P13591 858 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PDCP20941 246 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PSMA5P28066 241 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 SOX9P48436 509 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 CTCFP49711 727 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 HMGN5P82970 282 aaKnown RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PKP1Q13835 747 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 SLC9A5Q14940 896 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PLEKHO1Q53GL0 409 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 AXDND1Q5T1B0 1012 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 TSHZ3Q63HK5 1081 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 ZNF530Q6P9A1 599 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 SSH3Q8TE77 659 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 DNAAF4Q8WXU2 420 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 RCC1LQ96I51 464 aaKnown RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PWWP2AQ96N64 755 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 FCRL3Q96P31 734 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 UPF3BQ9BZI7 483 aaKnown RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 PCDH18Q9HCL0 1135 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 IL1RAPL2Q9NP60 686 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 C9orf78Q9NZ63 289 aaPredicted RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 LIMCH1Q9UPQ0 1083 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 R3HCC1Q9Y3T6 440 aaKnown RBP5.16□□□□□ -1.58
ATXN3-241ENST00000556374 CYP46A1Q9Y6A2 500 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 C4AP0C0L4 1744 aa5.16□□□□□ -1.58
ATXN3-241ENST00000556374 LTBP1Q14766 1721 aa5.15□□□□□ -1.58
ATXN3-241ENST00000556374 LAMB4A4D0S4 1761 aa5.15□□□□□ -1.58
ATXN3-241ENST00000556374 UQCRHLA0A096LP55 91 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 SH3D21A4FU49 640 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 VPS37CA5D8V6 355 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 GOLGA6L4A6NEF3 574 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 OTOL1A6NHN0 477 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 MEIS1O00470 390 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 DYNC1I1O14576 645 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 SGSM2O43147 1006 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 FIBPO43427 364 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 STX6O43752 255 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 ALDH1L1O75891 902 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 UQCRHP07919 91 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 CELA3BP08861 270 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 MSL3P1P0C860 447 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 EIF2S2P20042 333 aaKnown RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 CASTP20810 708 aaKnown RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 KRT85P78386 507 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 NEXNQ0ZGT2 675 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 GRB10Q13322 594 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 AMOTQ4VCS5 1084 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 PPP1R42Q7Z4L9 355 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 CABP7Q86V35 215 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 PPFIBP1Q86W92 1011 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 ZNF654Q8IZM8 581 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 FIBCD1Q8N539 461 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 NETO2Q8NC67 525 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 CPA5Q8WXQ8 436 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 EVI5LQ96CN4 794 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 IL17RAQ96F46 866 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 TSPAN17Q96FV3 270 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 PDLIM2Q96JY6 352 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 JAKMIP1Q96N16 626 aaKnown RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 GBP3Q9H0R5 595 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 PDCL3Q9H2J4 239 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 ECHDC1Q9NTX5 307 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 PDRG1Q9NUG6 133 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 DBF4Q9UBU7 674 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 CCNL1Q9UK58 526 aaPredicted RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 NUDT5Q9UKK9 219 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 PALD1Q9ULE6 856 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 KIF3AQ9Y496 699 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 USP42Q9H9J4 1324 aaKnown RBP5.15□□□□□ -1.59
ATXN3-241ENST00000556374 CNTNAP1P78357 1384 aa5.15□□□□□ -1.59
ATXN3-241ENST00000556374 RPAP1Q9BWH6 1393 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms