RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 DNAJC5GQ8N7S2 189 aa5.04□□□□□ -1.6
ATXN3-240ENST00000556339 RPGRQ92834 1020 aaKnown RBP5.04□□□□□ -1.6
ATXN3-240ENST00000556339 DDX11Q96FC9 970 aa5.04□□□□□ -1.6
ATXN3-240ENST00000556339 FGD4Q96M96 766 aa5.04□□□□□ -1.6
ATXN3-240ENST00000556339 NOX5Q96PH1 765 aa5.04□□□□□ -1.6
ATXN3-240ENST00000556339 LNPKQ9C0E8 428 aa5.04□□□□□ -1.6
ATXN3-240ENST00000556339 NYXQ9GZU5 481 aa5.04□□□□□ -1.6
ATXN3-240ENST00000556339 LAS1LQ9Y4W2 734 aaKnown RBP5.04□□□□□ -1.6
ATXN3-240ENST00000556339 ZBED9Q6R2W3 1325 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 FANCIQ9NVI1 1328 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 CBFA2T2O43439 604 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 NPHS1O60500 1241 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 DDNO94850 711 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-240ENST00000556339 FUCA1P04066 466 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 GPTP24298 496 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 RIPK4P57078 832 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 SLC7A5Q01650 507 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 NFE2L2Q16236 605 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 CCDC93Q567U6 631 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 FAM124AQ86V42 546 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 ZNF761Q86XN6 746 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-240ENST00000556339 SYNE4Q8N205 404 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 RBBP8NLQ8NC74 664 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-240ENST00000556339 CHST13Q8NET6 341 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 CPA5Q8WXQ8 436 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 JDP2Q8WYK2 163 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 AP5M1Q9H0R1 490 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 PHAXQ9H814 394 aaKnown RBP5.03□□□□□ -1.6
ATXN3-240ENST00000556339 PRKRIP1Q9H875 184 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-240ENST00000556339 ZNF277Q9NRM2 450 aaPredicted RBP5.03□□□□□ -1.6
ATXN3-240ENST00000556339 TSPYL4Q9UJ04 414 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 TJP1Q07157 1748 aa5.03□□□□□ -1.6
ATXN3-240ENST00000556339 ZNF536O15090 1300 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 LTBP3Q9NS15 1303 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 IQCA1LA6NCM1 817 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 EPHX1P07099 455 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 EIF6P56537 245 aaKnown RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 ADAM17P78536 824 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 DLX2Q07687 328 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 AIMP1Q12904 312 aaKnown RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 WDR43Q15061 677 aaKnown RBP eCLIP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 HLFQ16534 295 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 PPP2R5EQ16537 467 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 PPP1R42Q7Z4L9 355 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 DCP2Q8IU60 420 aaKnown RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 ADAMTS17Q8TE56 1095 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 RBM17Q96I25 401 aaKnown RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 MCMBPQ9BTE3 642 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 THUMPD2Q9BTF0 503 aaKnown RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 FBLN5Q9UBX5 448 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 CGGBP1Q9UFW8 167 aaPredicted RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 PCDHB10Q9UN67 800 aa5.02□□□□□ -1.61
ATXN3-240ENST00000556339 BRCA1P38398 1863 aaKnown RBP5.02□□□□□ -1.61
ATXN3-240ENST00000556339 ERVV-1B6SEH8 477 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 NTRK1P04629 796 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 ITGB3P05106 788 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 PRELPP51888 382 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 EIF4A1P60842 406 aaKnown RBP5.01□□□□□ -1.61
ATXN3-240ENST00000556339 LMOD3Q0VAK6 560 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 KIAA2012Q0VF49 1180 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 COL9A2Q14055 689 aaPredicted RBP5.01□□□□□ -1.61
ATXN3-240ENST00000556339 RALBP1Q15311 655 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 BORAQ6PGQ7 559 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 ETV3LQ6ZN32 361 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 ZC3H18Q86VM9 953 aaKnown RBP5.01□□□□□ -1.61
ATXN3-240ENST00000556339 YIPF4Q9BSR8 244 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 UTP14AQ9BVJ6 771 aaKnown RBP5.01□□□□□ -1.61
ATXN3-240ENST00000556339 KLHL25Q9H0H3 589 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 PCDH18Q9HCL0 1135 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.01□□□□□ -1.61
ATXN3-240ENST00000556339 MARCH2Q9P0N8 246 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 HACL1Q9UJ83 578 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 SIT1Q9Y3P8 196 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 SLX4Q8IY92 1834 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 CEMIPQ8WUJ3 1361 aa5.01□□□□□ -1.61
ATXN3-240ENST00000556339 CACNA1SQ13698 1873 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 KIAA1551Q9HCM1 1747 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 MAP3K15Q6ZN16 1313 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 DICER1Q9UPY3 1922 aaKnown RBP5□□□□□ -1.61
ATXN3-240ENST00000556339 IARSP41252 1262 aaKnown RBP5□□□□□ -1.61
ATXN3-240ENST00000556339 ZXDAP98168 799 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 FANCCQ00597 558 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 GRB10Q13322 594 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 SUSD4Q5VX71 490 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 OLFM4Q6UX06 510 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 CD300LDQ6UXZ3 194 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 CCDC146Q8IYE0 955 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 LGI4Q8N135 537 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 PPP1R14AQ96A00 147 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 C8orf49Q96NF6 230 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 BACH2Q9BYV9 841 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 TAF1DQ9H5J8 278 aaPredicted RBP5□□□□□ -1.61
ATXN3-240ENST00000556339 METTL5Q9NRN9 209 aaKnown RBP5□□□□□ -1.61
ATXN3-240ENST00000556339 SPATA6Q9NWH7 488 aaPredicted RBP5□□□□□ -1.61
ATXN3-240ENST00000556339 CLEC1BQ9P126 229 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 SRRDQ9UH36 339 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 MRC1P22897 1456 aa5□□□□□ -1.61
ATXN3-240ENST00000556339 C7orf72A4D263 438 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 PPIP5K2O43314 1243 aa4.99□□□□□ -1.61
ATXN3-240ENST00000556339 KCNH1O95259 989 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms